Showing : evolution • reset
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Job: PhD-position in bioinformatics / computational biology
Mergeomics Epigenome Evolution NGS Aging
17 days ago arne.sahm • 0
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Job: PostDoc in Computational Biology at Leibniz Institute for Environmental Medicine
Aging Epigenome Bioinformatics Mergeomics Evolution
11 months ago arne.sahm • 0
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Job: PhD student position: Vertebrate brain origins and evolution
PhD single-cell ComparativeGenomics evolution
2.5 years ago henrik.kaessmann • 0
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Job: Bioinformatics postdoc in comparative genomics
single-cell evolution Genomics Postdoc
2.5 years ago henrik.kaessmann • 0
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Job: Postdoc in Population Genomics - UC Davis
bioinformatics evolution sequencing genome analysis genomics Job
5.5 years ago hschmidt • 0
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display of synteny regions across multiple species
synteny translocation evolution conservation
5.7 years ago Bogdan ▴ 670
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Job: Post-doc in mathematical modeling on phenotypic evolution and embryonic development
job computational biology simulation evolution Gene network Job
6.7 years ago isaac.salazar • 0
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Job: postdoc 3yrs bioinformatics bacterial population genomics: Wellington, New Zealand
bacteria evolution population genomics Job
6.8 years ago una.ren • 0
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Job: Two Postdoc Positions in Evolutionary Single-Cell Genomics (experimental and computational)
evolution single-cell development differentiation cool Job
7.8 years ago Wolfgang Huber ★ 13k
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Job: Bioinformatics Postdoc in Functional Evolutionary Genomics, Heidelberg, Germany
rnaseq genomics evolution Job
8.1 years ago henrik.kaessmann • 0
10 results • Page 1 of 1
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Comment: How to retrieve gene ontology GO class from gene list? by bandconductor • 0
Thanks, this is potentially a much faster way than parsing BiomRt. However, it is only returning one GO term right now (biomaRt returns a f…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by James W. MacDonald 65k
Both `RUVseq` and `sva` are meant to be used to remove technical variability. The problem is the identification of variability that is tech…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by Alexandre • 0
Hello James, Thank you very much for your answer and taking the time to read my post. I understand your remark, but isn't the approach o…
Comment: PCA plot suggestions by JKim • 0
cross post: https://www.biostars.org/p/9593486/
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by James W. MacDonald 65k
You cannot correct for technical variability due to batch if samples are nested in batch. The technical and biological differences are comp…
Votes
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
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