Showing : exonmap • reset
2
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20
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5.3k
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Important r packages not available for R version 3.1.1
exonmap exon array analysis bioconductor
9.1 years ago svlachavas ▴ 830
0
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10
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1.7k
views
exonmap RMA function
Microarray Cancer affyPLM exonmap Microarray Cancer affyPLM exonmap
updated 16.2 years ago by ▴ 250 • written 16.3 years ago by 25k
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9
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1.6k
views
specifications for exonmap database config file?
GO exonmap GO exonmap
updated 15.4 years ago by ★ 2.0k • written 15.4 years ago by ▴ 70
0
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7
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1.7k
views
exonmap/xmapcore error
exonmap exonmap
updated 13.8 years ago by ★ 1.1k • written 13.8 years ago by ▴ 270
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6
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1.3k
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exonmap install
affy exonmap affy exonmap
updated 17.1 years ago by 65k • written 17.1 years ago by ★ 1.4k
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6
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1.6k
views
Create affyBatch from mouse exon array data using ReadAffy or extractAffyBatch() from aroma.affymetrix
cdf exonmap xps cdf exonmap xps
updated 15.8 years ago by ★ 3.9k • written 15.8 years ago by ▴ 190
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4
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1.3k
views
problems rma() with mouse exon affy data in exonmap package
Survival cdf genefilter affy simpleaffy plier exonmap Survival cdf genefilter affy
updated 16.6 years ago by 65k • written 16.6 years ago by ▴ 20
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votes
4
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1.4k
views
Problem with some exonmap X.to.Y functions
exonmap exonmap
updated 16.7 years ago by ★ 1.1k • written 16.7 years ago by ▴ 40
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2
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1.0k
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problems with Affymetrix probes id using exonmap and xmapcore
Annotation cdf exonmap xmapcore Annotation cdf exonmap xmapcore
13.0 years ago Tim Yates ▴ 250
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2
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1.1k
views
exon array annotation files
Annotation Cancer cdf exonmap Annotation Cancer cdf exonmap
updated 14.6 years ago by ▴ 190 • written 14.6 years ago by ▴ 970
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2
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1.1k
views
Affy Exon arrays
affy exonmap affy exonmap
updated 14.9 years ago by ★ 3.9k • written 14.9 years ago by ▴ 570
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2
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1.0k
views
exonmap questions
affy PROcess exonmap affy PROcess exonmap
updated 16.4 years ago by 65k • written 16.4 years ago by ▴ 890
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1
reply
1.0k
views
exonmap/xmapcore and splicing.index
exonmap xmapcore exonmap xmapcore
updated 13.6 years ago by ▴ 190 • written 13.6 years ago by ▴ 70
0
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1
reply
1.1k
views
Exonmap mapping problems
Survival genefilter affy plier affyio exonmap Survival genefilter affy plier affyio
updated 16.7 years ago by ▴ 120 • written 16.7 years ago by ▴ 10
0
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1
reply
923
views
exonmap question: rma (& plier) crashes
exonmap exonmap
updated 15.7 years ago by ★ 1.1k • written 15.7 years ago by ▴ 70
0
votes
1
reply
864
views
running exonmap package and chimp arrays
exonmap exonmap
updated 15.1 years ago by ▴ 50 • written 15.1 years ago by ▴ 240
2
votes
1
reply
1.3k
views
Best way to do quality control and analysis on Exon arrays
Annotation Cancer affy exonmap Annotation Cancer affy exonmap
updated 8.7 years ago by ▴ 10 • written 14.8 years ago by ★ 1.9k
0
votes
1
reply
888
views
exonMap problems
exonmap exonmap
updated 14.0 years ago by ▴ 250 • written 14.0 years ago by ▴ 40
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1
reply
720
views
(no subject)
exonmap xmapcore exonmap xmapcore
updated 13.5 years ago by ★ 7.2k • written 13.5 years ago by ▴ 10
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1
reply
879
views
ExonMap and xmap package question
probe limma convert exonmap probe limma convert exonmap
13.4 years ago Julie Zhu ★ 4.3k
0
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1
reply
954
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Easy way to map Exon array probes to coordinates?
Cancer exonmap xps Cancer exonmap xps
updated 12.6 years ago by ★ 3.9k • written 12.6 years ago by ▴ 260
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0
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921
views
Bioconductor Digest, Vol 73, Issue 8
Microarray Annotation GO hgu133plus2 probe biomaRt flowViz exonmap Microarray Annotation
15.1 years ago ramesh aathe ▴ 10
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0
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638
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Problem memory exonmap
exonmap exonmap
15.1 years ago Guido Leoni ▴ 200
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0
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747
views
exonmap and splicing index
limma exonmap limma exonmap
15.1 years ago Mathieu Parent ▴ 30
0
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0
replies
796
views
exonmap package - MySQL error
exonmap exonmap
16.5 years ago Dykema, Karl ▴ 90
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0
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804
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problems with Affymetrix probes id using exonmap and xmapcore
Annotation cdf exonmap xmapcore Annotation cdf exonmap xmapcore
13.0 years ago Gomez Moruno, Antonio ▴ 30
0
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0
replies
941
views
problem with function to interrogate x:Map (exonmap)
Survival genefilter affy plier affyio exonmap Survival genefilter affy plier affyio
16.6 years ago Wolfgang Raffelsberger ▴ 160
0
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0
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744
views
exonmap install problem
Microarray exonmap Microarray exonmap
16.7 years ago Sophie Gallina ▴ 40
0
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0
replies
740
views
Exonmap to xmapcore
exonmap xmapcore exonmap xmapcore
13.8 years ago Fong Chun Chan ▴ 130
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0
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632
views
[Fwd: exonmap install problem] Resolution note
exonmap exonmap
16.7 years ago Sophie Gallina ▴ 40
0
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0
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606
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exonmap install problem
Cancer exonmap Cancer exonmap
16.7 years ago Seth Falcon ★ 7.4k
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0
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738
views
Exonmap and Limma
limma exonmap limma exonmap
15.1 years ago Mathieu Parent ▴ 30
0
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0
replies
876
views
R: Doubt about the use of xmapcore Vs exonmap
exonmap xmapcore exonmap xmapcore
13.5 years ago Manca Marco PATH ▴ 340
0
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0
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827
views
Human Affymetrix Exon microarrays
exonmap exonmap
13.5 years ago Ernest Turro ▴ 30
0
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0
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673
views
bugs in exonmap?
exonmap exonmap
16.0 years ago Xin Zheng ▴ 30
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0
replies
701
views
Affy EXON Array: iterPLIER or RMA
affy exonmap affy exonmap
16.0 years ago juancui ▴ 10
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0
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910
views
exonmap error & questions (Affy mouse exon arrays)
exonmap exonmap
15.8 years ago Wolfgang Raffelsberger ▴ 160
0
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0
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895
views
Exonmap & xmapcore covdesc variable problem
affy exonmap xmapcore affy exonmap xmapcore
11.8 years ago Prime, John ▴ 10
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0
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1.1k
views
Affymetrix Array Rat Gene 1.0 ST - some annotation challenges
Annotation Normalization probe affy PROcess oligo exonmap Annotation Normalization probe
15.4 years ago Alexander C Cambon ▴ 30
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0
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665
views
[Fwd: Re: exonmap, xmap and xmapbridge]
exonmap exonmap
16.2 years ago Paul Hammer ▴ 220
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0
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913
views
exonmap problems with rma normalization
Normalization cdf exonmap Normalization cdf exonmap
13.0 years ago Gomez Moruno, Antonio ▴ 30
41 results • Page 1 of 1
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Answer: rlog transformation by Michael Love 41k
It is dependent on the other samples in the dataset.
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*"This worked really well for brain but has not work as well for lung as I get #N/A for many padj"* See the vignette for the cause of th…
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Starting from the very top, do you understand the error? You need to provide sample info that matches 1-to-1 the columns of the counts matr…
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Not a problem. However, if the values are very large (eg 1e6) or very small (eg 1e-6), it's a good idea to center and scale the variable…
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Usually I run `voomLmFit`, although in order to create the mean-variance trend plots for this particular post, I ran `voom`; I've checked -…
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Comment: Error in champ.load(): The following specified files do not exist
Answer: Error in read.metharray(basenames = files, extended = extended, verbose = verbos
Using GRanges and IRanges to simply get all chromosome data
A: Using GRanges and IRanges to simply get all chromosome data
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