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experimenthub
•
reset
6
votes
9
replies
4.1k
views
BiocFileCache/ExperimentHub/AnnotationHub temporary ERROR
BiocFileCache
AnnotationHub
ExperimentHub
updated 16 days ago by
Melissa
• 0 • written 5 months ago by
shepherl
3.8k
0
votes
4
replies
1.1k
views
Cannot connect to ExperimentHub server
ExperimentHub
4 months ago
yanling
• 0
0
votes
1
reply
664
views
scRNAseq package and cell type annotations
ExperimentHub
R
ExperimentHubData
scRNAseq
SingleR
updated 12 months ago by
Peter Hickey
▴ 670 • written 12 months ago by
cathalgking
▴ 10
0
votes
3
replies
662
views
Can I create my own, private ExperimentHub instance?
ExperimentHub
20 months ago • updated 19 months ago
sandmann.t
▴ 70
0
votes
1
reply
1.0k
views
News:
Updates to BiocFileCache, AnnotationHub, and ExperimentHub
BiocFileCache
AnnotationHub
ExperimentHub
cache
3.0 years ago
shepherl
3.8k
8
votes
33
replies
3.5k
views
Unable to download hg19.generanges as part of DMRcatedata package
DMRacte
DMRcateranges
ExperimentHub
hg19.generanges
updated 3.2 years ago by
friedmanhiccc
▴ 10 • written 3.6 years ago by
richardallenfriedmanbrooklyn
▴ 20
8
votes
16
replies
5.9k
views
Cannot connect to ExperimentHub server
ExperimentHub
AnnotationHub
SingleR
updated 3.7 years ago by
shepherl
3.8k • written 3.7 years ago by
enricoferrero
▴ 660
2
votes
2
replies
664
views
ExperimentHub downloading files to home directory (~)
ExperimentHub
updated 5.0 years ago by
shepherl
3.8k • written 5.0 years ago by
story.benjamin
▴ 20
4
votes
10
replies
1.7k
views
Can't access devel version of ExperimentHub in Travis CI
experimenthub
continuous-integration
5.5 years ago
Kyle Johnsen
▴ 20
1
vote
1
reply
706
views
What is the function of the 'make-metadata.R' script when making a ExperimentHub package?
experimenthub
updated 5.6 years ago by
shepherl
3.8k • written 5.6 years ago by
Kyle Johnsen
▴ 20
0
votes
7
replies
2.1k
views
ExperimentHub wackiness (which breaks packages that depend upon experimentHub-provided *data pkgs)
experimenthub
updated 5.6 years ago by
Martin Morgan
25k • written 5.6 years ago by
Tim Triche
★ 4.2k
5
votes
4
replies
1.3k
views
Eliminating repetitive calls to ExperimentHub
experimenthub
annotationhub
large dataset
5.9 years ago
slinker
▴ 20
5
votes
2
replies
1.6k
views
Setting ExperimentHub Cache Location
experimenthub
updated 6.1 years ago by
Martin Morgan
25k • written 6.1 years ago by
Mike Smith
★ 6.5k
5
votes
11
replies
2.5k
views
Certificate problem with ExperimentHub / AnnotationHub
software error
curatedmetagenomicdata
annotationhub
experimenthub
updated 7.3 years ago by
Levi Waldron
★ 1.1k • written 7.3 years ago by
morganx
▴ 10
5
votes
3
replies
1.4k
views
ExperimentHub()[["EH359"]] has character expression values
ExperimentHub
curatedMetagenomicData
updated 7.3 years ago by
Lucas Schiffer
▴ 240 • written 7.4 years ago by
Wolfgang Huber
★ 13k
2
votes
1
reply
1.1k
views
ExperimentHub - Error: database is corrupt
ExperimentHub
7.4 years ago
francois.collin
• 0
4
votes
7
replies
1.5k
views
AnnotationHub and ExperimentHub make "~" directory in my home
annotationhub
experimenthub
updated 7.6 years ago by
Valerie Obenchain
★ 6.8k • written 7.6 years ago by
Michael Love
41k
0
votes
2
replies
1.4k
views
Getting "error: database is corrupt" when using ExperimentHub()
experimenthub
gse62944
updated 7.7 years ago by
Valerie Obenchain
★ 6.8k • written 7.7 years ago by
shinx558
• 0
18 results • Page
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Jitendra
▴ 10
thanks Gordon, but our methylation epic array input file is quite big and we can't read it in R by just using laptop memory so we need to …
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Just to clarify, when I originally posted the title and tags had listed "DESeq2" and then the post was changed after my answer was added. …
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Not quite sure what you mean by clone or fork the package on latest version of R. Bioconductor runs all builds on the latest version of R.…
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It's pretty easy to do a two-group comparison using edgeR, but you seem to be stuck at the initial stage of reading data into R. If you exp…
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The reason why the two plots are different is that the first plot is a PCA plot while the second is a biplot. Quite different plots. The P…
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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