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Comment: Reproducibility issue with scran together with lapply and BiocParallel
by
ATpoint
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Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
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by
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Thank you for your comment!
1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right?
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IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
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I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
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