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factdesign
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830
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Multifactorial analysis with RMA and LIMMA of Affymetrix microarrays
GO
limma
factDesign
GO
limma
factDesign
20.0 years ago
Gordon Smyth
50k
0
votes
0
replies
899
views
Design in factDesign
limma
factDesign
limma
factDesign
20.0 years ago
Jordi Altirriba Gutiérrez
▴ 350
0
votes
1
reply
1.3k
views
[altirriba@hotmail.com: Design in factDesign] (fwd)
multtest
limma
factDesign
multtest
limma
factDesign
updated 20.0 years ago by
Jordi Altirriba Gutiérrez
▴ 350 • written 20.0 years ago by
Denise Scholtens
▴ 40
0
votes
2
replies
1.4k
views
[altirriba@hotmail.com: Design in factDesign] (fwd)
multtest
limma
factDesign
multtest
limma
factDesign
updated 20.0 years ago by
Kasper Daniel Hansen
▴ 630 • written 20.0 years ago by
Jordi Altirriba Gutiérrez
▴ 350
0
votes
0
replies
774
views
downstream analysis of differentially expressed genes
Microarray
Cancer
multtest
affy
limma
siggenes
factDesign
Microarray
Cancer
multtest
19.9 years ago
James W. MacDonald
65k
0
votes
1
reply
803
views
factdesign package
factDesign
factDesign
updated 19.9 years ago by
Denise Scholtens
▴ 40 • written 19.9 years ago by
Claire Wilson
▴ 280
0
votes
1
reply
783
views
factDesign - another question
factDesign
factDesign
updated 19.9 years ago by
Denise Scholtens
▴ 40 • written 19.9 years ago by
Claire Wilson
▴ 280
0
votes
0
replies
854
views
2x3 ANOVA
Microarray
multtest
gcrma
factDesign
PROcess
Microarray
multtest
gcrma
factDesign
PROcess
19.7 years ago
Jeff Lande
▴ 110
0
votes
1
reply
878
views
Fwd: Re: 2x3 ANOVA
factDesign
factDesign
updated 19.7 years ago by
Jeff Lande
▴ 110 • written 19.7 years ago by
Denise Scholtens
▴ 70
0
votes
2
replies
1.3k
views
'Factorial Design' package question
Survival
cdf
multtest
affy
factDesign
biomaRt
Survival
cdf
multtest
affy
factDesign
15.8 years ago
Glazko, Galina
▴ 350
0
votes
2
replies
2.8k
views
Random effects and variance components (was: Yet another nested design in limma)
affy
limma
siggenes
factDesign
maanova
affy
limma
siggenes
factDesign
maanova
updated 14.8 years ago by
James W. MacDonald
65k • written 14.8 years ago by
Paolo Innocenti
▴ 320
0
votes
0
replies
1.0k
views
Yet another nested design in limma
affy
limma
siggenes
factDesign
maanova
affy
limma
siggenes
factDesign
maanova
14.9 years ago
Paolo Innocenti
▴ 320
0
votes
2
replies
2.7k
views
Yet another nested design in limma
affy
limma
siggenes
factDesign
maanova
affy
limma
siggenes
factDesign
maanova
updated 14.9 years ago by
Paolo Innocenti
▴ 320 • written 14.9 years ago by
Gordon Smyth
50k
0
votes
0
replies
798
views
help with
factDesign
factDesign
14.8 years ago
Alberto Goldoni
▴ 420
0
votes
1
reply
975
views
help with factDesign package
factDesign
factDesign
updated 14.8 years ago by
Richard Pearson
▴ 160 • written 14.8 years ago by
Alberto Goldoni
▴ 420
0
votes
4
replies
1.2k
views
help with estrogen dataset in factdesign package
factDesign
factDesign
updated 14.8 years ago by
rgentleman
★ 5.5k • written 14.8 years ago by
Alberto Goldoni
▴ 420
0
votes
4
replies
1.1k
views
Does factDesign deal with two-color data?
Microarray
genefilter
affy
factDesign
Microarray
genefilter
affy
factDesign
updated 14.8 years ago by
Denise Scholtens
▴ 70 • written 14.8 years ago by
De-Jian ZHAO
▴ 240
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Comment: fgsea fork
by
Sofa
• 0
Workshops and summer schools offer immersive learning experiences outside traditional academic settings, catering to diverse interests and …
Comment: limma models out of memory issue on Slurm HPC
by
SamGG
▴ 330
> Alternatively you could run each linear model fit (var1 to var6) in a separate batch run, and again that would presumably work. I think …
Comment: fgsea fork
by
shepherl
3.8k
For What its worth BiocManager should also be able to install the github remotes `BiocManager::install("ctlab/fgsea")`
Comment: fgsea fork
by
alserg
▴ 240
I'm also not sure what you mean by fork, but you also can install the latest version of fgsea directly from GitHub with `devtools::install_…
Comment: limma models out of memory issue on Slurm HPC
by
Jitendra
▴ 10
thanks Gordon, but our methylation epic array input file is quite big and we can't read it in R by just using laptop memory so we need to …
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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