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fcs
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Modifying or writing a FCS file in R using the FlowCore package
FCS
flowframe
flowcore
flow cytometry
5.6 years ago
vonskopnik
▴ 10
3
votes
3
replies
2.5k
views
flowcore: z-Score normalization of flowSet (fsApply or normalize)
flowcore
fcs
normalization
flowstats
updated 8.7 years ago by
Jiang, Mike
★ 1.3k • written 8.8 years ago by
BenAbflack
• 0
0
votes
3
replies
1.3k
views
Loop for mass analyses and extraction of FCS data
Exprs
Lapply
FCS
for loop
flowcore
updated 6.5 years ago by
Jiang, Mike
★ 1.3k • written 6.5 years ago by
Wilson Yeo
• 0
3
votes
1
reply
2.0k
views
Convert Flowframe to matrix
flowcore
fcs
flow cytommetry
matrix
conversion
updated 4.8 years ago by
Jake Wagner
▴ 310 • written 4.8 years ago by
apurva
• 0
1
vote
1
reply
2.0k
views
Loading FCS files
FCS
flow cytometry
bioconductor
phenoData
Loading Data
updated 7.3 years ago by
SamGG
▴ 350 • written 7.3 years ago by
smajor
• 0
0
votes
0
replies
1.0k
views
How to load additional data from fcs files
fcs
concentration
experimentdata
7.0 years ago
jurg.spaak
• 0
0
votes
0
replies
1.0k
views
Trimming FCS files doesn't decrease size
FCS
8.7 years ago • updated 8.6 years ago
Nick England
• 0
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Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
ATpoint
★ 4.0k
As expected normalization is **way** off, meaning in simple terms that the cloud is too high. The deep-blue area should be along y=0. Try t…
Comment: Problem for loading Bioconductor package in R
by
touchstoneeduseo
• 0
Touchstone is your gateway to English language proficiency! Our institute offers tailored courses designed to prepare students for success …
Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
lonn
• 0
Thank you for your suggestions! Here is the MA plot: ![enter image description here][1] I tried several normalization methods with DiffBi…
Answer: OrgDb for maize
by
Guido Hooiveld
★ 3.9k
I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …
Comment: Theoretical WGCNA Question
by
Garrett
• 0
Thanks Peter!
Votes
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Comment: DEXSeq DEXSeqDataSet count matrix duplication
Comment: Error in champ.load(): The following specified files do not exist
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