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featurecount
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253
views
Fatal error: Wrong thread calling 'RunFinalizers'
featureCount
Rsubread
HPC
6 months ago
kthapa
• 0
0
votes
2
replies
987
views
output file conversion from FeatureCount to DESeq2 - no duplicate for samples
DESeq2
FeatureCount
updated 19 months ago by
ATpoint
★ 4.0k • written 19 months ago by
Jiayi
• 0
0
votes
1
reply
639
views
quantifying exom reads featureCount
ExomeSeq
featureCount
2.4 years ago
adR
▴ 30
4
votes
4
replies
1.5k
views
Issues loading a BAM file resulted from featurecounts
featurecount
rsubread
GenomicAlignments
4.0 years ago
Konstantinos Yeles
▴ 80
2
votes
6
replies
2.5k
views
featureCount error - cannot identify gene_id
dexseq
rsubread
featureCount
software error
updated 4.3 years ago by
Yang Liao
▴ 380 • written 4.3 years ago by
seung.ho.steven.choi
• 0
2
votes
1
reply
1.7k
views
How to change stringtie gene_id names with ref_gene_id when performing featureCount
featureCount
rna-seq
gene_id
re_gene_id
stringtie
updated 5.2 years ago by
Wei Shi
★ 3.6k • written 5.2 years ago by
IRAIA.MAIALEN
• 0
6 results • Page
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Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Votes
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
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