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Comment: How to read fcs3.2 files
by
James W. MacDonald
64k
You need to supply more information than saying you tried things and they didn't work. Show code with error messages.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Looks good then.
Answer: DESeq2 : stat or lfcshrink for GSEA analysis
by
Michael Love
41k
There have been many threads on this support site on this topic.
Answer: Filter genes by expression for voomLmFit
by
James W. MacDonald
64k
`voomLmFit` is meant to be able to correctly specify the degrees of freedom when you have lots of zeros (as well as iterating if you use `d…
Comment: How to get DMR for Infinium methylation EPIC v2
by
James W. MacDonald
64k
You want to make sure that you already have a `GenomicRatioSet` that you pass into `cpg.annotate`.
```
eset <- preprocessFunnorm(dat)
myAn…
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