Bioconductor FlowSOM

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FlowSOM

updated 4 months ago by SamGG ▴ 350 • written 4 months ago by agus_rizzo • 0

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FlowSOM

5 months ago agus_rizzo • 0

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516

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FlowSOM

updated 5 months ago by SamGG ▴ 350 • written 5 months ago by agus_rizzo • 0

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467

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FlowSOM cytofWorkflow

updated 13 months ago by helucro ▴ 70 • written 13 months ago by Anirban • 0

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765

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flowWorkspace CytoGLMM FlowSOM

2.4 years ago hbolouri • 0

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848

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FlowSOM

2.5 years ago jakub.savara • 0

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898

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FlowSOM

2.8 years ago ismail.ameran • 0

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1.6k

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FlowSOM

updated 3.4 years ago by sofie.vangassen ▴ 10 • written 3.4 years ago by Václav • 0

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1.3k

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Cytofast FlowSom CyTOF fcs files

3.5 years ago domenico.somma • 0

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1.1k

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flowcytometry flowSOM flowSET flowFrame

5.0 years ago fabrizio.benedetti.82 • 0

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1.4k

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flowsom consensusclusterplus

7.1 years ago Lukas Weber • 0

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1.1k

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flowcore flowsom

7.6 years ago jeremyeadler • 0

12 results • Page 1 of 1

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Comment: FilterByExpr low counts with small sample size by Gordon Smyth 50k

As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…

Comment: Batch correction and repeated measures by Gordon Smyth 50k

In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…

Comment: Methylation Analysis experiment design using Limma by Gordon Smyth 50k

I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…

Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0

Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…

Comment: Single-Cell Data Simulation from Bulk RNA-seq by wichaidi • 0

Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.

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Answer: How many of my genes from my gene list are in each KEGG pathway?

Comment: Light difference when using coef vs omit a group when compare 3 groups.

DESeq2 variance transformation error and plot dispersion Estimate

A: DESeq2 variance transformation error and plot dispersion Estimate

ensembl to hgnc symbols creates duplicates

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