Bioconductor Flowcore

Showing : flowcore • reset

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1.6k

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ncdfFlow flowCore

updated 7 months ago by osayou • 0 • written 3.5 years ago by anders.tondell ▴ 30

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872

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read.FCS flowCore

updated 4 months ago by SamGG ▴ 350 • written 4 months ago by das.traveller • 0

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495

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Source flowCore Repository git

updated 12 months ago by shepherl 3.8k • written 12 months ago by dominic.r • 0

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413

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Partec read.FCS flowCore

5 months ago mrescan • 0

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358

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flowCore

updated 4 months ago by James W. MacDonald 65k • written 4 months ago by Gabriel ▴ 10

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239

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flowWorkspace flowCore CytoML

updated 4 weeks ago by SamGG ▴ 350 • written 9 weeks ago by jarod ▴ 30

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370

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flowCore cytoMEM

9 months ago aguirre ▴ 20

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209

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flowDensity flowCore

3 months ago info ▴ 10

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104

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FlowCytometry flowWorkspace flowCore

5 weeks ago taylor.witte • 0

9 results • Page 1 of 1

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Comment: Reproducibility issue with scran together with lapply and BiocParallel by ATpoint ★ 4.0k

Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0

Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…

Answer: Reproducibility issue with scran together with lapply and BiocParallel by Aaron Lun ★ 28k

IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…

Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k

This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…

Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0

I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…

Votes

C: null model and DEXSeqDataSet object in DEXSEQ

A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?

A: How to explain how DESeq2 works to someone with zero bioinformatics background?

Answer: Interpret plot from DiffBind

Answer: How to retrieve gene ontology GO class from gene list?

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Supporter to JKim • 0