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flowcytometry
•
reset
0
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0
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97
views
Macsquant FCS in read.FCS & opencyto
FlowCytometry
flowWorkspace
flowCore
28 days ago
taylor.witte
• 0
0
votes
0
replies
242
views
News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
3 months ago
info
▴ 10
0
votes
0
replies
331
views
Merging 2 staining panels
FlowCytometry
flowCore
13 months ago
michaela.gregorova13
• 0
2
votes
1
reply
865
views
How to modify a compensation matrix in an fcs file
flowCore
FlowCytometry
17 months ago
aguirre
▴ 20
0
votes
0
replies
533
views
How to fix Flow-Data autoplot heat map
FlowCytometry
flowCore
openCyto
ggcyto
17 months ago
Dennis.hinkel
• 0
1
vote
1
reply
594
views
creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry
Opencyto
updated 17 months ago by
Kevin Blighe
★ 3.9k • written 17 months ago by
Noël
• 0
0
votes
0
replies
429
views
gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto
FlowCytometry
18 months ago
Noël
• 0
2
votes
9
replies
1.4k
views
Error when plotting flow cytometry data
FlowCytometry
flowCore
ggcyto
updated 19 months ago by
SamGG
▴ 350 • written 19 months ago by
alex
• 0
0
votes
0
replies
532
views
Reducing/sampling number of FCS events
FlowCytometry
flowCore
2.3 years ago
markkelly1983
▴ 20
0
votes
0
replies
674
views
Job:
Bioconductor developer
FlowCytometry
flowCore
2.4 years ago
markkelly1983
▴ 20
0
votes
1
reply
1.1k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
5.0 years ago
fabrizio.benedetti.82
• 0
0
votes
6
replies
2.1k
views
spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore
spillover
flowcytometry
updated 6.2 years ago by
Samuel Ahuno
• 0 • written 8.1 years ago by
Daniel Prieto
• 0
0
votes
1
reply
1.1k
views
[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore
flowcytometry
updated 6.2 years ago by
Jiang, Mike
★ 1.3k • written 6.2 years ago by
max.zhao
• 0
0
votes
1
reply
1.2k
views
Installation of "flowWorkspace" on Ubuntu fails
bioconductor
R
flowcytometry
7.2 years ago
mo
• 0
0
votes
2
replies
1.9k
views
Scaling fcs files with flowCore
flowCore
flowcytometry
8.0 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.8k
views
FlowWorkspace and norm2Filter
flowcytometry
opencyto
flowworkspace
flowcore
8.1 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.2k
views
FlowViz package question
flowviz
flowcytometry
8.1 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.4k
views
read.flowSet error Error: vector::_M_range_check
software error
read.flowset()
read.fcs
flowcore
flowcytometry
8.2 years ago
e.bestion
• 0
1
vote
2
replies
1.2k
views
openCyto - samples with low cell counts
flowcytometry
opencyto
8.2 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.3k
views
samples are reordered in read.flowSet
flowcore
flowcytometry
8.7 years ago
Jiang, Mike
★ 1.3k
0
votes
2
replies
1.9k
views
xyplot can't find channel (flowViz)
flowcore
flowviz
flowcytometry
updated 8.8 years ago by
Jiang, Mike
★ 1.3k • written 8.8 years ago by
ericjkort
• 0
0
votes
0
replies
1.3k
views
Re: FlowStats help
flowclust
opencyto
flowcytometry
9.1 years ago
Jiang, Mike
★ 1.3k
1
vote
1
reply
1.5k
views
flowCore: using read.FCS with which.lines is not time efficient?
flowcore
read.FCS
flowcytometry
updated 9.3 years ago by
Jiang, Mike
★ 1.3k • written 9.5 years ago by
skiaphrene
▴ 10
4
votes
1
reply
1.7k
views
News:
New Flow Cytometry Data Analysis Framework
flowcore
flowcytometry
opencyto
new
News
9.6 years ago
Greg Finak
▴ 150
0
votes
0
replies
1.2k
views
FlowCore - reading in flowSets
FlowCytometry
PROcess
flowCore
FlowCytometry
PROcess
flowCore
11.2 years ago
Pieter Coussement
▴ 30
25 results • Page
1 of 1
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Comment: Error in champ.load(): The following specified files do not exist
by
Basti
▴ 760
The error stems from the Basename column, please see solution here : https://support.bioconductor.org/p/p132482/
Comment: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures
by
Gordon Smyth
50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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