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flowcytometry
•
reset
2
votes
9
replies
1.3k
views
Error when plotting flow cytometry data
FlowCytometry
flowCore
ggcyto
updated 18 months ago by
SamGG
▴ 330 • written 18 months ago by
alex
• 0
0
votes
6
replies
2.0k
views
spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore
spillover
flowcytometry
updated 6.1 years ago by
Samuel Ahuno
• 0 • written 8.0 years ago by
Daniel Prieto
• 0
0
votes
2
replies
1.9k
views
Scaling fcs files with flowCore
flowCore
flowcytometry
8.0 years ago
Jiang, Mike
★ 1.3k
0
votes
2
replies
1.9k
views
xyplot can't find channel (flowViz)
flowcore
flowviz
flowcytometry
updated 8.7 years ago by
Jiang, Mike
★ 1.3k • written 8.7 years ago by
ericjkort
• 0
1
vote
2
replies
1.2k
views
openCyto - samples with low cell counts
flowcytometry
opencyto
8.2 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.2k
views
FlowViz package question
flowviz
flowcytometry
8.0 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.8k
views
FlowWorkspace and norm2Filter
flowcytometry
opencyto
flowworkspace
flowcore
8.0 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.2k
views
Installation of "flowWorkspace" on Ubuntu fails
bioconductor
R
flowcytometry
7.1 years ago
mo
• 0
0
votes
1
reply
1.0k
views
[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore
flowcytometry
updated 6.1 years ago by
Jiang, Mike
★ 1.3k • written 6.1 years ago by
max.zhao
• 0
0
votes
1
reply
1.0k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
4.9 years ago
fabrizio.benedetti.82
• 0
4
votes
1
reply
1.6k
views
News:
New Flow Cytometry Data Analysis Framework
flowcore
flowcytometry
opencyto
new
News
9.5 years ago
Greg Finak
▴ 150
1
vote
1
reply
1.5k
views
flowCore: using read.FCS with which.lines is not time efficient?
flowcore
read.FCS
flowcytometry
updated 9.2 years ago by
Jiang, Mike
★ 1.3k • written 9.4 years ago by
skiaphrene
▴ 10
1
vote
1
reply
559
views
creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry
Opencyto
updated 16 months ago by
Kevin Blighe
★ 3.9k • written 16 months ago by
Noël
• 0
2
votes
1
reply
796
views
How to modify a compensation matrix in an fcs file
flowCore
FlowCytometry
16 months ago
aguirre
▴ 20
0
votes
1
reply
1.2k
views
samples are reordered in read.flowSet
flowcore
flowcytometry
8.6 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.4k
views
read.flowSet error Error: vector::_M_range_check
software error
read.flowset()
read.fcs
flowcore
flowcytometry
8.1 years ago
e.bestion
• 0
0
votes
0
replies
407
views
gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto
FlowCytometry
17 months ago
Noël
• 0
0
votes
0
replies
1.3k
views
Re: FlowStats help
flowclust
opencyto
flowcytometry
9.0 years ago
Jiang, Mike
★ 1.3k
0
votes
0
replies
505
views
How to fix Flow-Data autoplot heat map
FlowCytometry
flowCore
openCyto
ggcyto
16 months ago
Dennis.hinkel
• 0
0
votes
0
replies
312
views
Merging 2 staining panels
FlowCytometry
flowCore
12 months ago
michaela.gregorova13
• 0
0
votes
0
replies
650
views
Job:
Bioconductor developer
FlowCytometry
flowCore
2.3 years ago
markkelly1983
▴ 20
0
votes
0
replies
192
views
News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
12 weeks ago
info
▴ 10
0
votes
0
replies
507
views
Reducing/sampling number of FCS events
FlowCytometry
flowCore
2.2 years ago
markkelly1983
▴ 20
0
votes
0
replies
1.1k
views
FlowCore - reading in flowSets
FlowCytometry
PROcess
flowCore
FlowCytometry
PROcess
flowCore
11.1 years ago
Pieter Coussement
▴ 30
24 results • Page
1 of 1
Recent ...
Replies
Answer: edgeR, 3 x 2 design with a batch effect and contrasts
by
Gordon Smyth
50k
If you include `0+` in the model formula, then the order of the batch and treatment factors in the model becomes important. You need `0+gro…
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
by
James W. MacDonald
65k
The main goal here is to map human gene symbols to something else, which you can use the `Orthology.eg.db` package to do. You could also us…
Comment: How can I compute AIC for MAST hurdle model fitted in the whole dataset?
by
rproendo
▴ 20
Hi OP, checking in to see if you found a solution to this issue. I'm also interested in using AICs to evaluate model fits in MAST.
Comment: padj-based gradient scale from barplot (clusterProfiler results) does not work p
by
Eva
▴ 10
Oh god, it is right, how I didn't realise before. I got confused with the scientific format of the numbers and I was in a loop for nothing.…
Comment: Downloading count matrix for full recount3 dataset
by
Leonardo Collado Torres
★ 1.0k
AFAIK it's not.
Votes
A: HLA genes missing from TxDb.Hsapiens.UCSC.hg38.knownGene
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
DESeq2 design with multiple factors
A: Three-factor design with DESeq2
A: DESeq2: multiple factors and comparison of a main factor between samples
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