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SNPrelate, snpgdsFst is excluding all snps on non-autosomes, how can I get it to stop doing that?
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Comment: Error: Faceting variables must have at least one value when plotting with ChIPQC
Exactly solve my problem! How come you found a solution like this! You are genius.
Comment: DESeq2 analyze MeRIP-seq
Hi Michael, I have a question considering the differential m6A peaks here. DESeq2 use the read couts for each peak as input. Does the de…
Comment: Limma adj.p.value the same for many different p.values
Thanks so much - I was trying to find another post about it but obviously didn't search for the right thing - this is exactly what I wanted!
Comment: Outlier gene counts either killing or driving DEGs with DESeq2. PLEASE HELP.
What are the Cook's values for these samples?
Answer: DIfferentially abundant taxa but some of them are not present in both groups (DE
You can just filter to ensure you only look at rows that have minimal counts in all groups that you require. If you have a design of ~ba…
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A: Error: Faceting variables must have at least one value when plotting with ChIPQC
C: Error: Faceting variables must have at least one value when plotting with ChIPQC
Answer: Limma adj.p.value the same for many different p.values
How to extract transcripts from Txdb with length >100
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