Bioconductor Gagedata

Showing : gagedata • reset

votes

replies

1.8k

views

KEGG gage gageData pathview

updated 3.6 years ago by Luo Weijun ★ 1.6k • written 3.6 years ago by MOHAMMAD • 0

vote

replies

1.3k

views

gage pathview gageData

written 3.7 years ago by Emilia ▴ 40

votes

replies

907

views

gage RNASeq gageData Pathways

2.5 years ago OST • 0

votes

replies

749

views

gage gageData

3.6 years ago jd348 • 0

votes

replies

236

views

kegg.gsets gageData gage KEGG

11 weeks ago cereyredondo • 0

5 results • Page 1 of 1

Recent ...

Replies

Comment: Bumphunter Algorithm Returns Regions with very few CpGs by h1rlw1ndphe4s0 • 0

Hey [subway surfers][1], Is this the algorithm you mentioned yesterday? [1]: https://subwaysurfs.io

Comment: Bioconductor Digest, Vol 68, Issue 7 by parikapain1353 • 0

Hi [melon sandbox][1], is there any new update to this file? [1]: https://melon-sandbox.com

Answer: Which input data is acceptable for MAST? by Andrew_McDavid ▴ 270

Not too familiar with SCT v2. If it also has a point-mass at zero and the non-zero component is roughly-symmetric, then it might work ok w…

Answer: segfault when using singleR with Azimuth reference by James W. MacDonald 67k

The training step is usually faster than the classification step, so you might try running `trainSingleR` on the reference to see if that i…

Comment: Batch Effect in DESeq2, how to control, how to remove it, how to address biologi by James W. MacDonald 67k

You don't. I believe Fisher has a quote that applies here. Also, please don't add to five year old posts. Start a new one.

Votes

Answer: How to control batch effect if Group and batch are same?

Comment: Convert HGVS Representation back to Reference Genome Coordinates

Answer: How to control batch effect if Group and batch are same?

Awards • All

Popular Question to Andrew_McDavid ▴ 270

Scholar to Ryan C. Thompson ★ 7.9k