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gagedata
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KEGG analysis for plasmodium
KEGG
gage
gageData
pathview
updated 2.0 years ago by
Luo Weijun
★ 1.6k • written 2.0 years ago by
MOHAMMAD
• 0
1
vote
2
replies
724
views
Can I create a gene set using GAGE?
gage
pathview
gageData
written 2.2 years ago by
Emilia
▴ 30
0
votes
0
replies
289
views
Pathway Analysis using GAGE
gage
RNASeq
gageData
Pathways
11 months ago
OST
• 0
0
votes
0
replies
328
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Setting threshold with gage for gene set analysis
gage
gageData
2.0 years ago
jd348
• 0
4 results • Page
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Recent ...
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Comment: Duplicate row.names when building SummarizedExperiment with make_se in DEP
by
Simran
• 0
did you get your answer? I've been using DEP several times but the error only shows up now for some reason?
Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
by
tahir.msajid
• 0
Got it. Thank you Rory.
Comment: RUVSeq and DESeq2 -- all variables in design formula must be columns in colData
by
garbuzov
• 0
Thanks! That was it... why did I think they were equivalent?
Comment: Time-course, comparison of two groups
by
boczniak767
▴ 720
Thank you @gordon-smyth for your patience and time. I see that I need to reread carefully the user guide so I could follow your advice.
Comment: Time-course, comparison of two groups
by
boczniak767
▴ 720
> Do you have actually have data or is this is a theoretical exercise? A the moment I don't have data from my principal investigator's exp…
Votes
Calculation of module membership in WGCNA
A: converting ensembl transcript ID to ensemble gene: problem & missing values
Comment: From a ENST to ENSG
Comment: From a ENST to ENSG
Answer: Help with Error in DiffBind
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Malcolm Cook
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