Showing : gene expression data • reset
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Errors in Processing GSE36411_non-normalized.txt file of Illumina data using lumi Package and limma package
limma lumi illumina gene expression data
updated 3.1 years ago by 43k • written 3.1 years ago by • 0
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fRMA results different for Windows and Linux
frma expr gene expression data affy
updated 3.3 years ago by 57k • written 3.3 years ago by • 0
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Interpreting Affymetrix Human Genome U133 Plus 2.0 samples
gene expression gene expression data cel affy affymatrix
3.5 years ago torgeirous • 0
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Job: Job: Computational Biologists - Expanding the impact of genomic data on drug development (Immuneering Corporation, Cambridge MA and New York NY)
rna-seq computational biology cns disease gene expression data neurodegeneration Job
3.9 years ago mmartin ▴ 20
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Possible(validated) methodology implemented in R for integrating and analyzing clinical data with gene expression data in R
data integration clinicaldata gene expression data PET
5.9 years ago svlachavas ▴ 780
5 results • Page 1 of 1
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Comment: DESeq2 - understanding intercept and contrasts by sarah-spie • 0
Thank you, dear Michael, and thank you for being so active in this forum in general! Could you have a look at this line, in which I wand to…
Answer: tximeta countsFromAbundance for downstream analysis by Michael Love 33k
The counts will not be closely correlated to the TPM across genes, because the gene length is included in the gene count but not in the TPM…
Answer: DESeq2 - understanding intercept and contrasts by Michael Love 33k
For questions on setting up the statistical design and contrasts, I recommend to consult with a local statistician or someone familiar with…
Answer: Interaction terms and selection of coef in normal and shrunk results by Michael Love 33k
Please see the diagram in the vignette on interactions, but for further questions on setting up the design, I recommend to consult with a l…
Answer: about baseMean in DEseq2 by Michael Love 33k
More information about the columns is here: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#access-…
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