Showing : gene • reset
0
votes
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291
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gene aligning reference
geneRecommender gene
updated 5 months ago by 65k • written 5 months ago by • 0
0
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0
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448
views
topGO: how do I retrieve my genes contributing to the GO term enrichment
gene enrichment topGO GO retrieve
12 months ago Priya • 0
0
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2
replies
542
views
How to find the number of protein-coding genes in each chromosome arm in human?
gene chromosome proteincodinggene
12 months ago Liliian • 0
3
votes
2
replies
532
views
please resolve the issue
gene ExpressionData
updated 13 months ago by 65k • written 13 months ago by • 0
1
vote
4
replies
792
views
RNA-seq analysis between a wildtype vs a double microRNA kockout mouse brain
microRNA gene RNASeqRData edgeR geneontology
18 months ago faiza • 0
0
votes
1
reply
805
views
WGCNA - Network construction and module detection
gene Clustering wgcna flashclust
updated 19 months ago by ▴ 50 • written 20 months ago by ▴ 20
0
votes
2
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3.6k
views
Gene body coverage plot
plot gene GenomicRanges Coverage R
updated 2.1 years ago by ▴ 20 • written 2.1 years ago by • 0
0
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2
replies
1.6k
views
How to filter the coding protein genes by EnsDb.Hsapiens.v86
EnsDb.Hsapiens.v86 gene
2.1 years ago beslinail • 0
0
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0
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521
views
Gene expression changes in one condition
RNASeq Gene ExpressionData
2.4 years ago AZ ▴ 30
6
votes
7
replies
2.2k
views
GEOquery reading error on Windows.
GEOquery GEO Gene
updated 2.5 years ago by 65k • written 2.5 years ago by ▴ 50
1
vote
2
replies
720
views
gene ontologies for a set of genes
gene ontology
2.7 years ago Bogdan ▴ 670
0
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0
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619
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TFutils database
TFutils mouse gene convert
2.9 years ago nicocillari • 0
0
votes
2
replies
998
views
I want to use global test.
gene r clst rpy globaltest
3.0 years ago Kim • 0
5
votes
5
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1.8k
views
threeUTRsByTranscript per GENE
GenomicFeatures Transcript gene threeUTRsByTranscript
updated 3.2 years ago by ★ 1.5k • written 4.7 years ago by ▴ 10
1
vote
3
replies
1.7k
views
copy number variation analysis (CNV)
copynumber plot visualization NGS gene
updated 3.4 years ago by ▴ 190 • written 3.5 years ago by • 0
0
votes
3
replies
998
views
PureCN gene LOH very common, amp/del not
PureCN gene amplification deletion loh
updated 3.9 years ago by ▴ 130 • written 3.9 years ago by ▴ 10
0
votes
4
replies
988
views
Fonction of genes/metabolites in a pathway?
gene metabolite functionnal annotation pathways
updated 4.1 years ago by ★ 3.9k • written 4.1 years ago by • 0
2
votes
4
replies
957
views
Joint pathway Analysis using both gene and metabolite data sets
data integration gene metabolite
4.1 years ago emisecherre • 0
9
votes
10
replies
1.4k
views
Mapping of GENE symbols into ENTREZ
limma annotation Gene
4.6 years ago • updated 4.2 years ago omarrafiqued ▴ 50
1
vote
4
replies
1.1k
views
gene Isoforms quantification using RNA-seq data
gene isoform quantification rna-seq
updated 4.7 years ago by ★ 1.3k • written 4.7 years ago by • 0
2
votes
5
replies
1.2k
views
DESeq2-result files (.csv): Is there a convention for the IDs (e.g. gene names if produced for genes)
deseq2 gene format
4.8 years ago miriam.mueller • 0
3
votes
3
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1.2k
views
Discrepancies between topGO output and input
go topGO gene ontology enrichment
updated 4.8 years ago by 65k • written 4.8 years ago by • 0
6
votes
2
replies
2.2k
views
How to add my own Entrez Gene IDs rather than using the ones from a default package?
annotation entrez gene ids software error
updated 5.0 years ago by 50k • written 5.0 years ago by ▴ 60
0
votes
2
replies
3.6k
views
Web Scraping From Pubmd (I want to extract gene articles form pubmed abstract and pubmed id i want to extract for number of genes)
cancer gene
updated 5.2 years ago by 25k • written 5.2 years ago by • 0
0
votes
5
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6.2k
views
Adding information to the DESeq2 output file (gene name and expression levels for each sample(
deseq2 gene columns output
updated 8.5 years ago by 41k • written 8.5 years ago by ▴ 10
3
votes
2
replies
3.5k
views
How to Find OMIM id's Corresponding to a List of Gene Symbols in R?
microarray omim gene disorder
updated 9.1 years ago by ▴ 30 • written 9.1 years ago by ▴ 20
26 results • Page 1 of 1
Recent ...
Replies
Answer: List of Deprecated Packages for Bioc3.19 by shepherl 3.8k
singleCellTK has been fixed and will remain in Bioconductor
Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10
Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…
Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10
Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…
Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k
It is indeed better. Anyway, did you notice this part in the output from `str(ortologos_filtrados)`: `$Gene.ID : int 115709372 115716460 …
Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10
I'm new here, but its better now?
Votes
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
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