Showing : geneanswers • reset
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categories can not be recognized in Bioconductor/GeneAnswers
geneanswers
updated 7.3 years ago by 50k • written 7.3 years ago by • 0
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Re: GenesAnswers for Arabidopsis!
GeneAnswers annotation Arabidopsis GO
8.9 years ago lhuang7 ▴ 50
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GeneAnswer for bacteria metagenomes
geneanswers metagenome kegg
updated 7.8 years ago by ★ 1.2k • written 9.4 years ago by ▴ 100
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Gene Ontologies exploration
goProfiles GeneAnswers goProfiles GeneAnswers
updated 11.2 years ago by ★ 7.2k • written 11.2 years ago by ▴ 310
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[Geneanswers] About the meaning of colours in networks
Network GeneAnswers Network GeneAnswers
11.4 years ago Enrico Ferrero ▴ 10
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help ith GeneAnswers / annotation package
Annotation GO oligo GeneAnswers Annotation GO oligo GeneAnswers
11.5 years ago Ingrid Mercier ▴ 60
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question about getGOList in GeneAnswers
GO GeneAnswers GO GeneAnswers
12.0 years ago Zhi Zhang ▴ 70
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Pie chart
GO GeneAnswers GO GeneAnswers
12.6 years ago Guest User ★ 13k
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question about xvfb-run GeneAnswers
GO GeneAnswers GO GeneAnswers
updated 12.6 years ago by 65k • written 12.6 years ago by ★ 1.3k
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NCI pathways to graphNEL
Pathways graph Rredland GeneAnswers Pathways graph Rredland GeneAnswers
13.2 years ago laurent jacob ▴ 100
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Error running GeneAnswers and Rgraphviz
Rgraphviz GeneAnswers Rgraphviz GeneAnswers
updated 13.3 years ago by ▴ 340 • written 13.3 years ago by ▴ 10
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Answer: Reproducibility issue with scran together with lapply and BiocParallel by Aaron Lun ★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by shuwangxinze1996 • 0
Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough? Thank …
Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k
This comment helps.
Votes
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
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