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Answer: How to figure out the FC value from Limma by beslinail • 0
I tried to FC column to dbl from chr. But FC colomn is changed by NA genlist_filter <- read_csv(file = "AD_control5.csv") genlist_fil…
Comment: WGCNA: correlations module-traits, and module membership-gene significance by annamariabugaj ▴ 10
Hello, sorry for my late response. this is the heatmap: https://drive.google.com/file/d/165fizcsWcA2uzRPVV2cKNPOcqM1d2WfG/view?usp=sharing…
Comment: regression analysis for epic array methylation data using limma by nabiyogesh ▴ 10
Thanks you so much Basti, could you please let me know how do we decide what coefficient number should we used? Why we are using coef=2 her…
Comment: How to figure out the FC value from Limma by beslinail • 0
Thanks alot for the feedback. I also read the file.tsv in R but logFC 246.249.360.536.749 282.311.618.510.231 624.874.186.717.992 610.289…
Comment: Limma for paired and unpaired samples. Strange number of DEGs in unpaired sample by ATpoint ★ 1.2k
Cross-posted and answered by @gordonsmyth https://www.biostars.org/p/9524346/
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Comment: Question on RNA-Seq single sample data analysis in EdgeR
Answer: Question on RNA-Seq single sample data analysis in EdgeR
Answer: Question on RNA-Seq single sample data analysis in EdgeR
Answer: How to run GSVA with partially NA genes
Answer: How to run GSVA with partially NA genes
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