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rgentleman
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480
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updated 16.1 years ago by
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Gordon Smyth
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90
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19.1 years ago
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18.8 years ago
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James W. MacDonald
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Holger Schwender
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written 15.5 years ago by
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updated 19.4 years ago by
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written 19.4 years ago by
James Wettenhall
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18.5 years ago
James Wettenhall
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Byron Ellis
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updated 18.4 years ago by
Ramon Diaz
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written 18.5 years ago by
Jose Duarte
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18.4 years ago
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18.2 years ago
Joshi, Nina NIH/NCI
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James W. MacDonald
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Recent ...
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Answer: regression analysis for epic array methylation data using limma
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Which package do you intend to use ? There are many tutorials in packages vignette that show you how to perform differential methylation an…
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I believe this question is not related to any Bioconductor package, I think the only solution to this question is to search yourself in Pub…
Comment: Warnings when using "ashr" in lfcshrinkage for DESeq2
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Upgrading the package solved the issue, thanks!
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The error comes from the `mixsqp` package, see https://github.com/stephens999/ashr/issues/131. Upgrading the package to the most recent 0.3…
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Thanks for the suggestion.
I ran the following filtering criteria:
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keep <- rowSums(counts(dds) >= 10) >= 5
dds <- dds[keep,]
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It ga…
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