Bioconductor Genomicdatacommons

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manifest GDCdownload GenomicDataCommons

8 months ago xiaofeiwang198266 • 0

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TCGA GenomicDataCommons GDC

written 9 months ago by António Miguel de Jesus Domingues ▴ 490

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TCGA GenomicDataCommons

updated 2.4 years ago by Robert Castelo ★ 3.2k • written 2.4 years ago by Hashirama ▴ 10

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GenomicDataCommons

2.7 years ago xiaofeiwang18266 ▴ 50

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TCGA GenomicDataCommons

3.1 years ago Ezgi ▴ 60

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GenomicDataCommons R

updated 2.7 years ago by xiaofeiwang18266 ▴ 50 • written 4.2 years ago by gv ▴ 40

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TCGAutils TCGAbiolinks GenomicDataCommons

updated 4.8 years ago by Marcel Ramos 690 • written 4.8 years ago by Dario Strbenac ★ 1.5k

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genomicdatacommons tcga gdc rest http

updated 5.2 years ago by Sean Davis 21k • written 5.2 years ago by mk ▴ 20

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Comment: flowStats Search Error by SamGG ▴ 350

So do I. The direct URL is https://bioconductor.org/packages/3.18/bioc/html/flowStats.html

Comment: Interaction Terms in DESeq2 - Shrinkage by andrebolerbarros ▴ 20

Thanks for your suggestion! For `apeglm` shrinkage, on that scenario, I would have to relevel the variable and then re-run with `nbinomWal…

Answer: Interaction Terms in DESeq2 - Shrinkage by swbarnes2 ★ 1.3k

I think the simpler way to do it is to make a new column of conc_time_tissue all stuck together, and make that column your design. Then …

Comment: SingleR Label.Ont by lisia • 0

De online casino's bij [One Casino][1] zullen je achterlaten met de mooiste herinneringen. De site geeft je een geweldige kans om een keuze…

Comment: GSVA error by Alex • 0

Thank you, Robert! The update sorted everything out.

Votes

Answer: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var