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ggbio
•
reset
18
votes
4
replies
1.6k
views
`ggbio` package can't be loaded
ggbio
3.3 years ago
Batool
▴ 370
12
votes
7
replies
4.4k
views
Plot ggplot2 and ggbio Images Together
ggplot2
ggbio
cowplot
updated 4.7 years ago by
Assa Yeroslaviz
★ 1.5k • written 8.9 years ago by
andrew.j.skelton73
▴ 370
7
votes
9
replies
2.9k
views
Install ggbio development version
ggbio
development
package installation
updated 7.5 years ago by
Martin Morgan
25k • written 7.5 years ago by
zx8754
▴ 10
4
votes
3
replies
2.5k
views
ggbio error: Objects of type OrganismDb not supported by autoplot
GO
OrganismDb
ggbio
GO
OrganismDb
ggbio
updated 9.4 years ago by
dalloliogm
▴ 50 • written 9.7 years ago by
Georg Otto
▴ 120
3
votes
2
replies
1.7k
views
Cannot use color/ fill arguments outside of aes() in ggbio karyogram layout
ggbio
8.1 years ago
Mario Saare
▴ 20
2
votes
7
replies
2.1k
views
ggbio, RnBeads and 3.2.2
ggbio
rnbeads
rversion3.2.2
8.4 years ago
areyoujokingme
• 0
2
votes
3
replies
2.2k
views
No color support in ggbio for autoplot
ggbio
autoplot
color
vignette
updated 8.2 years ago by
aaron
▴ 10 • written 8.2 years ago by
timothypyork
• 0
2
votes
1
reply
2.1k
views
ggbio: examples of overlaying multiple assay datasets
ggbio
visualization
ggbio
updated 9.6 years ago by
Panagiotis Moulos
▴ 30 • written 9.6 years ago by
Abhishek Pratap
▴ 190
2
votes
2
replies
954
views
aes label in ggbio_1.26.1 with ggplot2_3.0.0
ggbio
ggplot2
5.6 years ago
Lescai, Francesco
▴ 380
2
votes
3
replies
2.3k
views
ggbio circular plot
ggbio
SNP
granges
updated 8.3 years ago by
Michael Lawrence
★ 11k • written 8.3 years ago by
Marcin Grzybowski
• 0
2
votes
4
replies
1.3k
views
ggbio tracks () does not allow "call" class in the "main" slot of the function
ggbio
ggplot2
call
plot
updated 7.3 years ago by
Michael Lawrence
★ 11k • written 7.3 years ago by
oswaldo.lorenzo
▴ 10
2
votes
3
replies
1.7k
views
ggbio tracks() function handling x axis in the wrong way
ggbio
ggplot2
tracks
genomics
plot
7.6 years ago
oswaldo.lorenzo
▴ 10
2
votes
5
replies
3.3k
views
Error in GenomeInfoDb:::getDanglingSeqlevels
ggbio
6.8 years ago
Bogdan
▴ 670
1
vote
1
reply
1.6k
views
How to show chromosome position and SNP label at the same time in x axis
ggbio
ggplot2
genomics
plot
7.6 years ago
oswaldo.lorenzo
▴ 10
1
vote
5
replies
937
views
how can I add a label for granges using the geom_rect ?
ggbio
17 months ago • updated 16 months ago
潘晓光
• 0
1
vote
1
reply
1.0k
views
Bug in ggbio's geom_alignment when using facet
ggbio
facet
updated 9.1 years ago by
Michael Lawrence
★ 11k • written 9.2 years ago by
kristoffer.vittingseerup
▴ 20
1
vote
2
replies
1.6k
views
ggbio won't plot ideogram in R version 3.3.1, ggplot2 version 3.1.0
ggbio
ggplot2
5.4 years ago
t.fadason
▴ 10
1
vote
3
replies
2.8k
views
Combining LD matrix plot with SNP and gene data with ggplot / ggbio tracks() function
ggplot2
ggbio
plot
tracks
bioconductor
updated 7.2 years ago by
Michael Lawrence
★ 11k • written 7.2 years ago by
oswaldo.lorenzo
▴ 10
1
vote
1
reply
1.2k
views
Problems with parsing of geom_alignment()'s type column (from ggbio)
ggbio
geom_alignment
updated 9.1 years ago by
Michael Lawrence
★ 11k • written 9.2 years ago by
kristoffer.vittingseerup
▴ 20
1
vote
3
replies
1.6k
views
ggbio - change transcript label sizes
ggbio
annotation
updated 24 months ago by
chrisclarkson100
▴ 50 • written 4.7 years ago by
Kevin Blighe
★ 3.9k
1
vote
1
reply
1.2k
views
Add main title to ggbio's karyogram
ggbio
karyogram
granges
updated 7.5 years ago by
Michael Lawrence
★ 11k • written 7.5 years ago by
TimothéeFlutre
▴ 80
1
vote
3
replies
1.4k
views
circular display in ggbio
ggbio
8.7 years ago
Bogdan
▴ 670
1
vote
4
replies
2.5k
views
Giemsa stain annotation/nomenclature for UCSC cytoband tracks
ucsc
ucsctrack
ggbio
Gviz
hg19
updated 7.2 years ago by
maximilianh
▴ 10 • written 7.2 years ago by
metamaden
▴ 10
1
vote
4
replies
2.4k
views
Cannot get ggbio autoplot to run successfully on R 3.2 (3.2.2 or 3.2.3)
ggbio
ggplot2
autoplot
bioconductor
gene models
updated 8.2 years ago by
snf
▴ 10 • written 8.3 years ago by
danhovelson
▴ 10
1
vote
11
replies
4.7k
views
Error when install ggbio
ggbio
biocinstaller
updated 8.3 years ago by
Livia Rasp
• 0 • written 8.3 years ago by
syrttgump
▴ 20
1
vote
3
replies
2.0k
views
Loading alternative genomes into ggbio
ggbio
8.6 years ago
daniel.antony.pass
• 0
1
vote
1
reply
995
views
ggbio labels with ggrepeal on circos plot
ggbio
r
graphics
5.5 years ago
franceschini.gianmarco
• 0
0
votes
1
reply
1.0k
views
Changing the x axis size using tracks (ggbio)
ggbio
updated 9.6 years ago by
James W. MacDonald
65k • written 9.6 years ago by
Vinicius Henrique da Silva
▴ 40
0
votes
3
replies
2.0k
views
trouble installing affycoretools for R 3.0
VariantAnnotation
GO
BSgenome
affycoretools
BSgenome
VariantAnnotation
ggbio
GO
BSgenome
updated 11.0 years ago by
James W. MacDonald
65k • written 11.0 years ago by
Jenny Drnevich
★ 2.0k
0
votes
1
reply
1.3k
views
Error with autoplot of transcriptDB object
ggbio
9.6 years ago
Mark Dunning
★ 1.1k
0
votes
0
replies
1.3k
views
autoplot() in ggbio package for txdb object
ggbio
ggbio
9.7 years ago
Tengfei Yin
▴ 490
0
votes
3
replies
1.4k
views
help with visualizing structural variation data
ggbio
ggbio
11.3 years ago
Abhishek Pratap
▴ 410
0
votes
1
reply
1.0k
views
status of visnab
Visualization
ggbio
Gviz
Visualization
ggbio
Gviz
updated 11.0 years ago by
Tengfei Yin
▴ 420 • written 11.0 years ago by
Abhishek Pratap
▴ 410
0
votes
1
reply
1.4k
views
Positional Details with Features through UniProt.ws Ultimately to display as tracks in ggbio
annotate
ggbio
annotate
ggbio
updated 9.7 years ago by
Tengfei Yin
▴ 490 • written 9.7 years ago by
Anne Deslattes Mays
▴ 30
0
votes
6
replies
1.4k
views
pileupAsGRanges depth limit
Sequencing
ggbio
Sequencing
ggbio
updated 11.3 years ago by
Martin Morgan
25k • written 11.3 years ago by
Mark Dunning
★ 1.1k
0
votes
1
reply
1.9k
views
plotIdeogram for non-human or mouse genome
ideogram
ggbio
ideogram
ggbio
updated 9.7 years ago by
Tengfei Yin
▴ 490 • written 9.7 years ago by
Mark Dunning
★ 1.1k
0
votes
0
replies
1.2k
views
autoplot() in ggbio package for txdb object
ggbio
ggbio
9.8 years ago
sun
▴ 100
0
votes
4
replies
3.3k
views
How to combine VCF-class and data.frame with annotations
GO
annotate
convert
ggbio
GO
annotate
convert
ggbio
written 11.6 years ago by
Stefan Dentro
▴ 70
0
votes
1
reply
1.3k
views
FW: Overlay Gene Expression on SNP (copy number) data
SNP
Coverage
Network
Cancer
TranscriptDb
IRanges
RCytoscape
ggbio
Gviz
SNP
Coverage
updated 12.0 years ago by
Tim Triche
★ 4.2k • written 12.0 years ago by
Ekta Jain
▴ 370
0
votes
4
replies
1.9k
views
GGally ggbio conflict/bug
ggbio
ggbio
updated 10.4 years ago by
Michael Lawrence
★ 11k • written 10.5 years ago by
Paulson, Ariel
▴ 10
0
votes
2
replies
1.0k
views
color-coded arch intensity in ggbio
ggbio
ggbio
updated 9.9 years ago by
Tengfei Yin
▴ 420 • written 9.9 years ago by
Bogdan
▴ 670
0
votes
0
replies
978
views
ggbio circular plot rectangle colours - possible bug
ggbio
9.1 years ago
Miss Agnieszka Aleksandra Golicz
▴ 40
0
votes
5
replies
1.4k
views
Graphing coverage() results
ggbio
genomicalignments
bam
9.1 years ago
gen
▴ 30
0
votes
1
reply
1.2k
views
tracks() and plotIdeogram() with non desired results in ggbio 1.10.9
TranscriptDb
ideogram
ggbio
TranscriptDb
ideogram
ggbio
updated 10.4 years ago by
Leonardo Collado Torres
★ 1.0k • written 10.4 years ago by
Tengfei Yin
▴ 490
0
votes
2
replies
1.0k
views
about tracks() in ggbio
ggbio
9.0 years ago
Bogdan
▴ 670
0
votes
1
reply
1.0k
views
visualization of interactions
ggbio
ggbio
updated 11.7 years ago by
Tengfei Yin
▴ 420 • written 11.7 years ago by
Guest User
★ 13k
0
votes
1
reply
1.5k
views
Newbie - Adding Labels to Individual Genes with ggbio?
r
ggbio
ggplot2
dnaseq
genomicranges
updated 8.8 years ago by
arfranco
▴ 130 • written 8.8 years ago by
fathniz
• 0
0
votes
0
replies
1.8k
views
ggbio circular plot y axis scale
ggbio
9.2 years ago
Miss Agnieszka Aleksandra Golicz
▴ 40
0
votes
5
replies
1.7k
views
circular display in ggbio for gene tracks
ggbio
8.7 years ago
Bogdan
▴ 670
0
votes
0
replies
902
views
ggbio circle "scale.unit"
ggbio
9.2 years ago
rwness
• 0
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