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ggplot
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Error in .External.graphics(C_layout, num.rows, num.cols, mat, as.integer(num.figures)
edger
ggplot
updated 6.6 years ago by
Aaron Lun
★ 28k • written 6.6 years ago by
mictadlo
▴ 10
2
votes
1
reply
1.8k
views
Error in plot.new() : figure margins too large
edger
ggplot
updated 6.6 years ago by
Gordon Smyth
50k • written 6.6 years ago by
mictadlo
▴ 10
0
votes
0
replies
1.7k
views
How to solve Error in ggplot could not find function "+<-"?
ggplot
2.3 years ago
nattzy94
▴ 20
1
vote
1
reply
1.5k
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ggplot same data, different plots
ggplot2
ggplot
plot
updated 8.2 years ago by
James W. MacDonald
65k • written 8.2 years ago by
alptaciroglu
▴ 50
0
votes
2
replies
707
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ggplot and geom_lines for clustering
ggplot
updated 12 months ago by
Konstantinos Yeles
▴ 80 • written 13 months ago by
R_diot
• 0
0
votes
0
replies
650
views
How to plot "chromosomewise" "allele frequency" of a "Hybrid" in comparison to its "Inbred parents"
ggplot2
ggplot
cmplot
5.1 years ago
gens8094
• 0
0
votes
0
replies
640
views
How to plot "chromosomewise" "allele frequency" of a "Hybrid" in comparison to its "Inbred parents"
ggplot
cmplot
ggplot2
5.1 years ago
gens8094
• 0
0
votes
0
replies
557
views
TCseq plot
TCseq
ggplot
22 months ago
jochen
• 0
1
vote
1
reply
544
views
problem regarding bioconducter package installation
ggplot
updated 3.0 years ago by
Kevin Blighe
★ 3.9k • written 3.0 years ago by
abhisek001
• 0
0
votes
0
replies
419
views
Using a clustree object to draw a "classical" dendogram
ggplot
dendogram
ggtreeExtra
clustree
ggtree
13 months ago
christian.dina
• 0
10 results • Page
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Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR)
by
Michael Love
41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
With all my love, thank you Guido, GOxploreR beeing a big ally for me. I don't know how to be grateful right now.
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You didn't generate it with an experiment, you made it up: Your PCA doesn't look like a good RNASeq experiment, because it's not.
Answer: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
swbarnes2
★ 1.3k
Your contrast is comparing LGR5 to Homeostasis. The bottom 2 are fine, it's the top one that is wrong. Are you sure this step isn't misla…
Comment: get BM error
by
James W. MacDonald
65k
I believe you need NCBI Gene IDs for KEGG, in which case you may need to map. The three genes you have shown here don't map, and of those t…
Votes
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
C: when to apply quantile normalization with voom in limma/voom framework with RNA-
A: How to know if I should use voomWithQualityWeights() or not?
A: Weird results (ribosomal proteins / Y-linked genes) in limma/voom
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