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github
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Job:
Bioconductor Core developers group opening
R
cloud
github
python
git
20 months ago
Vincent J. Carey, Jr.
6.7k
4
votes
2
replies
714
views
good-first-issue (or similar) GitHub
Culture
R
GitHub
updated 21 months ago by
Michael Love
41k • written 21 months ago by
BioInfoBeginnerrr
• 0
1
vote
2
replies
809
views
How to install R package from GitHub
Install
github
updated 2.1 years ago by
shepherl
3.8k • written 2.1 years ago by
Padam
• 0
0
votes
1
reply
1.9k
views
Installation of r2excel package
github
packages
updated 5.3 years ago by
Gordon Smyth
50k • written 5.3 years ago by
thkapell
▴ 10
0
votes
1
reply
1.2k
views
flowCL - svn conversion to Github
flowCL
git-svn bridge
github
updated 6.3 years ago by
nitesh.turaga
▴ 140 • written 6.3 years ago by
Justin Meskas
▴ 60
0
votes
1
reply
1.5k
views
GIT: Fetch package source from remote upstream
git
github
developers
updated 6.3 years ago by
nitesh.turaga
▴ 140 • written 6.3 years ago by
wirth
• 0
2
votes
2
replies
3.0k
views
Remote rejected after resetting to previous commit
git
github
updated 6.5 years ago by
nitesh.turaga
▴ 140 • written 6.5 years ago by
alex.gos90
▴ 10
1
vote
3
replies
1.9k
views
Access to github repository- how does one know if their ssh public key was accepted
github
package updates
developers
package development
6.6 years ago
rtraborn
• 0
1
vote
2
replies
1.6k
views
Bioconductor / COHCAP GitHub Update
github
git-svn bridge
git
6.7 years ago
cwarden45
• 0
6
votes
0
replies
2.3k
views
News:
Bioconductor git server is now LIVE!
git
github
svn
git-svn bridge
git mirror
News
6.7 years ago
nitesh.turaga
▴ 140
3
votes
2
replies
2.8k
views
How do I clean .git folder?
Git
github
updated 6.8 years ago by
Martin Morgan
25k • written 6.8 years ago by
Mohamad S. Hasan
• 0
0
votes
1
reply
1.2k
views
Question about sumbition process and biocviews
biocviews
biocparallel
github
package submission
updated 7.5 years ago by
Martin Morgan
25k • written 7.5 years ago by
ioannis.vardaxis
▴ 30
0
votes
8
replies
1.9k
views
Bioconductor SVN server error
software error
github
7.7 years ago
emathe
• 0
0
votes
1
reply
1.0k
views
What happends with a package in submission through the old issue tracker?
github
package submission
rDGIdb
issue tracker
updated 7.8 years ago by
Martin Morgan
25k • written 7.8 years ago by
Thomas Thurnherr
• 0
1
vote
3
replies
1.8k
views
manage github dependency , not CRAN nor bioc
dependency
github
8.3 years ago
kmezhoud
▴ 10
1
vote
2
replies
1.6k
views
GitHub Continuous Integration, unit-tests, vignettes: R Packaging
github
vignette
test
developers
updated 8.3 years ago by
Dan Tenenbaum
★ 8.2k • written 8.3 years ago by
anthonycolombo60
• 0
6
votes
6
replies
3.3k
views
News:
Bioconductor Git/GitHub Mirrors
git
github
git-svn bridge
subversion
News
updated 8.9 years ago by
Guangchuang Yu
★ 1.2k • written 8.9 years ago by
Dan Tenenbaum
★ 8.2k
17 results • Page
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Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
How am i making the data? I am using the DESeq2 output data which I had generated
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
by
Michael Love
41k
Sounds reasonable. For ranking genes, you could choose those with low decay rate but removing thoses where it is indistinguishable from …
Answer: Citation for edgeR user guide
by
Gordon Smyth
50k
Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You are just making up data? What is the point of this exercise?
Comment: How to retrieve gene ontology GO class?
by
James W. MacDonald
65k
What do you mean by 'the information'? Do you have things in particular that you want?
Votes
Answer: Citation for edgeR user guide
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
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