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glimma
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4
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1.9k
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Glimma Interactive plots for RNAseq
Glimma
R markdown
rnaseq
7.1 years ago
Aurora
▴ 20
0
votes
1
reply
1.1k
views
Why does the Glimma package require R >= 3.4.0 ?
glimma
updated 7.1 years ago by
Shian Su
▴ 40 • written 7.1 years ago by
gil.hornung
• 0
1
vote
3
replies
1.9k
views
problem installing the Glimma package
glimma
7.0 years ago
omran.allatif
• 0
2
votes
2
replies
1.3k
views
What to do when a bug is found in a BioConductor package (Glimma)
glimma
software error
updated 5.6 years ago by
Gordon Smyth
52k • written 5.6 years ago by
Sam
▴ 10
7
votes
6
replies
1.8k
views
BiocStyle::html_document does not render Glimma plots
Glimma
BiocStyle
updated 2.7 years ago by
Mike Smith
★ 6.6k • written 2.7 years ago by
neilzhao
▴ 30
1
vote
1
reply
1.1k
views
Extracting the tophits from limma Volcanoplot and issue with geneIDs
limma
edgeR
Glimma
updated 2.2 years ago by
Gordon Smyth
52k • written 2.2 years ago by
Mohammad
• 0
1
vote
2
replies
1.3k
views
bug in Glimma - anno can't have T/F
Glimma
8.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
2
replies
1.3k
views
glimmaMA() produces blank plot if have annot column named "gene"
Glimma
updated 3.1 years ago by
Shian Su
▴ 40 • written 3.8 years ago by
Jenny Drnevich
★ 2.0k
0
votes
0
replies
1.3k
views
Glimma: Error: Length of groups must be equal to the number of columns in counts
Glimma
RNASeq
3.2 years ago
Jonas
• 0
0
votes
0
replies
727
views
Complex design in DESeq2 doesn't seem to be supported in Glimma
limma
Glimma
RNASeq
DESeq2
3.2 years ago
Jonas
• 0
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Comment: Merging EPICV1 and V2 betas
by
Garbayo
• 0
[BitLife][1]: Life Simulator, usually referred to as BitLife, is a mobile life simulator game created by developer CandyWriter LLC on Septe…
Comment: Package developing and interoperation with Bioconductor
by
shepherl
4.1k
Using an example with SummarizedExperiment would satisfy the requirement; however the package should take the object directly and not just…
Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files
by
Sofia
• 0
1. I have tried to update the packages and R but to no avail. I keep getting either this error or : `Error in H5Fclose(file$H5Identifier) …
Comment: Validity of SingleR with very small bulk RNAseq reference
by
Rohit
• 0
Hi @nhaus So, what did you end up doing in such a scenario? I am facing a similar challenge
Comment: CpGs with genomic positions greater than the chromosome size in EPICv2?
by
Joshua Llano
• 0
Thank you for your reply James. I was worried that it was my mistake.
Votes
Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?
Answer: Explannation for ROAST results
A: How DiffBind run PCA based on peak data?
Looking for equivalent EPIC chip v1 vs. v2 annotation variables
Properly constructing a hypergeometric test
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