Bioconductor Goprofiles

Showing : goprofiles • reset

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674

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GO.db GOfuncR GO GOSim goProfiles

updated 18 months ago by Basti ▴ 780 • written 18 months ago by yeluo • 0

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2.9k

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goprofiles AnnotationForge Bimap GO

9.6 years ago artur ▴ 80

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1.6k

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GO goProfiles GO goProfiles

10.0 years ago Arnaud Mounier ▴ 40

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1.2k

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GO Organism goProfiles GO Organism goProfiles

10.7 years ago Marc Carlson ★ 7.2k

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1.7k

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goProfiles goProfiles

10.7 years ago Guest User ★ 13k

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1.1k

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goProfiles GeneAnswers goProfiles GeneAnswers

updated 11.2 years ago by Marc Carlson ★ 7.2k • written 11.2 years ago by Jose M Garcia Manteiga ▴ 310

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1.0k

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GO goProfiles GO goProfiles

updated 11.5 years ago by Steve Lianoglou ★ 13k • written 11.5 years ago by Guest User ★ 13k

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1.4k

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GO goProfiles GO goProfiles

updated 13.8 years ago by Marc Carlson ★ 7.2k • written 13.8 years ago by Xiaohui Wu ▴ 280

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1.2k

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GO Cancer Prostate goProfiles GO Cancer Prostate goProfiles

updated 13.8 years ago by James W. MacDonald 65k • written 13.8 years ago by Xiaohui Wu ▴ 280

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776

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Category goProfiles Category goProfiles

13.9 years ago wei tie ▴ 30

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1.0k

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Annotation GO topGO goProfiles Annotation GO topGO goProfiles

14.6 years ago Johannes Hanson ▴ 30

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893

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GO graph goProfiles GO graph goProfiles

14.8 years ago Jean-Pierre Desvignes ▴ 60

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1.8k

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goProfiles goProfiles

updated 14.9 years ago by Steve Lianoglou ★ 13k • written 14.9 years ago by Massimo Pinto ▴ 390

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1.1k

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GO mouse4302 goProfiles GO mouse4302 goProfiles

updated 15.9 years ago by Alex Sanchez ▴ 20 • written 15.9 years ago by Straubhaar, Juerg ▴ 300

14 results • Page 1 of 1

Recent ...

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Comment: How to tell and visualize up/down regulation of pathways from clusterprofiler gs by Guangchuang Yu ★ 1.2k

an example is also presented in <https://pubmed.ncbi.nlm.nih.gov/34557778/>.

Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k

Nothing would prevent you from using the `enrichGO` function (or any other function for over-representation analysis [ORA]) with only 14 ge…

Comment: Different Shrunk Log2FC according with reference by andrebolerbarros ▴ 20

Thanks @atpoint for your answer! The issue with that is then it severely hinders the possiblity of using `apeglm` shrinking approach, sinc…

Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by ATpoint ★ 4.0k

The error that is relevant is `Aborted (core dumped)`. This line 2890 refers to the C source code that throws the error, it is not relevant…

Answer: Different Shrunk Log2FC according with reference by ATpoint ★ 4.0k

Please see: https://support.bioconductor.org/p/p134551/ I asked basically the same before. In short, reference level might have an influ…

Votes

C: SGSeq: moving toward diffex from SGSeq analysis

DEXSeq-Error in FUN(X[[i]], ...) : subscript out of bounds

Subset DEXSeqDataSet In DEXSeq

How to get all possible comparisons in DiffBind

Comment: get BM error

Awards • All

Scholar to ATpoint ★ 4.0k