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goprofiles
•
reset
3
votes
9
replies
2.8k
views
Create object "Go3AnnDbBimap" and include it in a org.Xx.eg.db package to use with goProfiles and goTools
goprofiles
AnnotationForge
Bimap
GO
9.6 years ago
artur
▴ 80
0
votes
8
replies
1.8k
views
PreProcess and Limma 'done'. What directions now?
goProfiles
goProfiles
updated 14.9 years ago by
Steve Lianoglou
★ 13k • written 14.9 years ago by
Massimo Pinto
▴ 390
0
votes
0
replies
892
views
plotProfiles (goProfiles) and bitmap
GO
graph
goProfiles
GO
graph
goProfiles
14.8 years ago
Jean-Pierre Desvignes
▴ 60
0
votes
0
replies
1.0k
views
How to compare GO results
Annotation
GO
topGO
goProfiles
Annotation
GO
topGO
goProfiles
14.6 years ago
Johannes Hanson
▴ 30
0
votes
0
replies
776
views
Problem about using "goProfiles"
Category
goProfiles
Category
goProfiles
13.9 years ago
wei tie
▴ 30
0
votes
1
reply
1.2k
views
How to cluster genes based on their GO term in Arabidopsis?
GO
Cancer
Prostate
goProfiles
GO
Cancer
Prostate
goProfiles
updated 13.8 years ago by
James W. MacDonald
65k • written 13.8 years ago by
Xiaohui Wu
▴ 280
0
votes
2
replies
1.4k
views
How to make my own GO.db?
GO
goProfiles
GO
goProfiles
updated 13.8 years ago by
Marc Carlson
★ 7.2k • written 13.8 years ago by
Xiaohui Wu
▴ 280
0
votes
2
replies
1.0k
views
Profiles
GO
goProfiles
GO
goProfiles
updated 11.5 years ago by
Steve Lianoglou
★ 13k • written 11.5 years ago by
Guest User
★ 13k
0
votes
2
replies
1.1k
views
Gene Ontologies exploration
goProfiles
GeneAnswers
goProfiles
GeneAnswers
updated 11.2 years ago by
Marc Carlson
★ 7.2k • written 11.2 years ago by
Jose M Garcia Manteiga
▴ 310
0
votes
0
replies
1.6k
views
Ontology lack in goProfiles : no BP or CC just MF
GO
goProfiles
GO
goProfiles
10.0 years ago
Arnaud Mounier
▴ 40
0
votes
0
replies
1.7k
views
error while using goProfiles package on arabidopsis entrez gene IDs
goProfiles
goProfiles
10.7 years ago
Guest User
★ 13k
0
votes
0
replies
1.2k
views
error while using goProfiles package on arabidopsis entrez gene IDs
GO
Organism
goProfiles
GO
Organism
goProfiles
10.7 years ago
Marc Carlson
★ 7.2k
0
votes
2
replies
1.1k
views
namespace error with goProfiles package
GO
mouse4302
goProfiles
GO
mouse4302
goProfiles
updated 15.9 years ago by
Alex Sanchez
▴ 20 • written 15.9 years ago by
Straubhaar, Juerg
▴ 300
0
votes
1
reply
667
views
I want to convert the go enrichment result to a data frame (tidy data)with two column which one is the gene symbol and the other is go term. Any one…
GO.db
GOfuncR
GO
GOSim
goProfiles
updated 18 months ago by
Basti
▴ 770 • written 18 months ago by
yeluo
• 0
14 results • Page
1 of 1
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Answer: Cannabis and KEGGgraph
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deeenes
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Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
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Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Chris
• 0
Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …
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Hi Michael, thanks for the answer! I'll have a look : )
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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
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Answer: OrgDb for maize
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How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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