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grch38
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Rsubread function buildindex cannot handle the GRCh38.p7 reference from NCBI
rsubread
ncbi
GRCh38
hg38
updated 7.5 years ago by
Wei Shi
★ 3.6k • written 7.5 years ago by
jan.soderman
• 0
4
votes
2
replies
2.2k
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TCGA-biolink: GRCH38 RNA-seq, normalized counts matrix, Converting ensemble gene name into common gene name
tcgabiolinks
grch38
annotation
updated 6.5 years ago by
Tiago C. Silva
▴ 270 • written 6.5 years ago by
salvocomplicazioni1
• 0
5
votes
2
replies
2.7k
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News:
Ensembl release 81 is out!
human
mouse
GRCh38
biomart
Ensembl
News
updated 8.8 years ago by
Sonali Arora
▴ 390 • written 8.8 years ago by
Thomas Maurel
▴ 800
2
votes
1
reply
1.0k
views
Problems with Edge R normalization in same sample but using different ref genomes.
normalized counts
grch37
grch38
r bioconductor
6.5 years ago
salvocomplicazioni1
• 0
0
votes
2
replies
850
views
Chromosme Name: "CHR_HSCHR19..."
biomart
ensembl
grch38
6.1 years ago
rbenel
▴ 40
5 results • Page
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Answer: Cannabis and KEGGgraph
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deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
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Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
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russ.bainer
▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Chris
• 0
Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …
Comment: How to retrieve detailed regression results from deseq2
by
Weiqian
▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
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How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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