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Showing :
gviz-package
•
reset
0
votes
0
replies
811
views
Combine UCSC mm9 conservation and hg19 SNP data
gviz-package
6.4 years ago • updated 2.2 years ago
underscore
• 0
4
votes
4
replies
2.2k
views
Gviz: ylim of the AlignmentsTrack
gviz
gviz-package
updated 2.3 years ago by
Pariksheet Nanda
▴ 120 • written 5.6 years ago by
wsciekly.maciek
▴ 10
2
votes
9
replies
1.8k
views
Gviz: decreasing tick resolution
gviz
gviz-package
updated 5.3 years ago by
Robert Ivanek
▴ 730 • written 5.3 years ago by
willbradshaw
• 0
1
vote
2
replies
2.1k
views
Gviz: Setting Up Colour / Fill for AnnotationTrack (strand-dependent colour)
Gviz
gviz-package
GFF
annotationtrack
strand-dependent
updated 5.3 years ago by
Robert Ivanek
▴ 730 • written 5.3 years ago by
JezDD
• 0
0
votes
0
replies
2.0k
views
Gviz: plotting multiple data tracks with the same y-axis limit using Gviz
Gviz
gviz-package
5.7 years ago • updated 5.6 years ago
Mthabisi Moyo
▴ 30
1
vote
1
reply
1.3k
views
How to plot circular genomes with gviz?
gviz
gviz-package
5.7 years ago
Christopher.Rands
▴ 10
2
votes
6
replies
3.6k
views
Gviz change color of groups
gviz-package
gviz
updated 5.7 years ago by
florian.hahne@novartis.com
★ 1.6k • written 5.8 years ago by
franceschini.gianmarco
• 0
0
votes
1
reply
888
views
Gviz: Histograms in layers instead of stacked ANSWERED!
R
Gviz
gviz-package
5.8 years ago
stephen.williams
▴ 10
0
votes
1
reply
867
views
Gviz: Multiple BiomartGeneRegionTrack one object for Composite plots
gviz
gviz-package
5.8 years ago
stephen.williams
▴ 10
1
vote
0
replies
867
views
Arrange Gviz plotTracks() figure and basic R plot on a canvas
gviz
gviz-package
5.9 years ago
izzy.yichao.cai
▴ 10
2
votes
3
replies
917
views
Gviz: Flip tracks so 5 prime end always on left hand side.
gviz
gviz-package
updated 5.9 years ago by
Robert Ivanek
▴ 730 • written 5.9 years ago by
stephen.williams
▴ 10
0
votes
1
reply
1.0k
views
Error GC content and conservation visualization with Gviz
gviz
gviz-package
updated 5.9 years ago by
Robert Ivanek
▴ 730 • written 5.9 years ago by
h
• 0
0
votes
2
replies
1.1k
views
Gviz: Draw horizontal line on DataTrack
gviz
gviz-package
datatrack
plottracks
6.1 years ago
stephen.williams
▴ 10
0
votes
2
replies
1.2k
views
GViz, different group colours
gviz
gviz-package
updated 6.2 years ago by
James W. MacDonald
65k • written 6.2 years ago by
p1990
• 0
0
votes
4
replies
1.7k
views
Gviz IdeogramTrack fails with Error: failed to load HTTP resource
gviz
gviz-package
rtracklayer
http
6.2 years ago
enricoferrero
▴ 660
3
votes
6
replies
1.8k
views
gviz ideogramTrack connection error
gviz-package
gviz
updated 6.2 years ago by
Robert Ivanek
▴ 730 • written 6.2 years ago by
alperyilmaz
▴ 20
2
votes
0
replies
1.9k
views
Gviz plot combined with multiple ggplot2 plots
gviz
gviz-package
ggplot2
6.6 years ago
christian.aichmueller
▴ 20
0
votes
0
replies
759
views
Gviz Custom ordering of features in Annotationtrack
gviz
gviz-package
6.8 years ago
mnaymik
• 0
1
vote
1
reply
1.4k
views
Selecting only one transcript in BiomartGeneRegionTrack
gviz
gviz-package
R
updated 6.9 years ago by
Jeremy Ng
▴ 180 • written 6.9 years ago by
klim314
• 0
3
votes
2
replies
1.7k
views
Gviz AnnotationTrack id above feature
gviz-package
gviz
annotation
updated 7.0 years ago by
florian.hahne@novartis.com
★ 1.6k • written 7.0 years ago by
bruce.moran
▴ 30
0
votes
0
replies
1.0k
views
Data grouping with DataTrack or AlignmentTrack classes
gviz
gviz-package
7.1 years ago
jma1991
▴ 70
0
votes
0
replies
1.3k
views
Gviz: control height of items within BiomartGeneRegionTrack (StackedTrack)
Gviz
gviz-package
7.1 years ago
Kort, Eric
▴ 220
2
votes
4
replies
2.7k
views
Error using Gviz and BiomartGeneRegionTrack, version problem?
Gviz-package
biomart
plottracks
ucsctrack
stickleback
updated 7.1 years ago by
florian.hahne@novartis.com
★ 1.6k • written 7.1 years ago by
br
• 0
23 results • Page
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Comment: Differential peaks that were not identified in diffbind were identified in diseq
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lonn
• 0
Thank you for your suggestions! Here is the MA plot: ![enter image description here][1] I tried several normalization methods with DiffBi…
Answer: OrgDb for maize
by
Guido Hooiveld
★ 3.9k
I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …
Comment: Theoretical WGCNA Question
by
Garrett
• 0
Thanks Peter!
Comment: FGSEA pre-ranked input in increasing order or decreasing
by
sropri
• 0
Thank you!
Comment: FGSEA pre-ranked input in increasing order or decreasing
by
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▴ 240
They are reorder in the decreasing order.
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Answer: OrgDb for maize
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How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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