Bioconductor Hdf5

Showing : hdf5 • reset

votes

replies

11k

views

rhdf5 r hdf5

updated 11 months ago by Yijing • 0 • written 6.8 years ago by him4u324 ▴ 10

vote

replies

4.8k

views

rhdf5 hdf5

8.5 years ago trombe.piju • 0

votes

replies

4.8k

views

rhdf5 hdf5

updated 6.2 years ago by Mike Smith ★ 6.5k • written 6.2 years ago by felicien.meunier ▴ 40

votes

replies

3.4k

views

installation dependency library hdf5

8.6 years ago Ulrik Stervbo ▴ 30

vote

3.4k

views

rhdf5 hdf5

updated 8.8 years ago by Nathaniel Hayden ▴ 180 • written 8.8 years ago by serefarikan • 0

votes

replies

3.0k

views

hdf5 DelayedArray summarizedexperiment Tutorial

7.2 years ago Vincent J. Carey, Jr. 6.7k

vote

replies

2.9k

views

hdf5 h5 rhdf5

updated 21 months ago by Mike Smith ★ 6.5k • written 21 months ago by dNand • 0

votes

replies

2.8k

views

deseq2 hdf5 rangedsummarizedexperiment rnaseq

6.7 years ago Jakob Petereit • 0

votes

replies

2.3k

views

hdf5 rhdf5 hdf

updated 8.1 years ago by Bernd Fischer ▴ 550 • written 8.1 years ago by manfredodiporcia • 0

votes

replies

2.1k

views

rhdf5 hdf5

updated 8.8 years ago by Bernd Fischer ▴ 550 • written 8.8 years ago by Mike Smith ★ 6.5k

votes

1.9k

views

biom json hdf5 qiime phyloseq

updated 7.5 years ago by Bernd Fischer ▴ 550 • written 7.5 years ago by newmanss • 0

votes

replies

1.8k

views

software error tximport hdf5

updated 4.5 years ago by Michael Love 41k • written 4.5 years ago by me5537 ▴ 10

vote

replies

1.8k

views

rhdf5 hdf5

updated 9.4 years ago by Bernd Fischer ▴ 550 • written 9.4 years ago by Nathaniel Hayden ▴ 180

vote

replies

1.7k

views

rhdf5 hdf5 dependencies

updated 7.8 years ago by Mike Smith ★ 6.5k • written 7.8 years ago by thabermann • 0

votes

replies

1.3k

views

rhdf5 hdf5

updated 5.9 years ago by Mike Smith ★ 6.5k • written 5.9 years ago by channsoden • 0

vote

1.3k

views

rhdf5 hdf5

updated 6.7 years ago by Mike Smith ★ 6.5k • written 7.0 years ago by Kipper Fletez-Brant ▴ 150

16 results • Page 1 of 1

Recent ...

Replies

Comment: FilterByExpr low counts with small sample size by Gordon Smyth 50k

As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…

Comment: Batch correction and repeated measures by Gordon Smyth 50k

In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…

Comment: Methylation Analysis experiment design using Limma by Gordon Smyth 50k

I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…

Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0

Hi Gordon, thank you so much for further guidance! I discussed this issue with doctor know about Alzheimer and they don't expect significan…

Comment: Single-Cell Data Simulation from Bulk RNA-seq by wichaidi • 0

Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.

Votes

Answer: How many of my genes from my gene list are in each KEGG pathway?

Comment: Light difference when using coef vs omit a group when compare 3 groups.

DESeq2 variance transformation error and plot dispersion Estimate

A: DESeq2 variance transformation error and plot dispersion Estimate

ensembl to hgnc symbols creates duplicates

Awards • All