Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
hdf5
•
reset
8
votes
11
replies
11k
views
R: error while reading .h5 files from R using rdhf5 package
rhdf5
r
hdf5
updated 12 months ago by
Yijing
• 0 • written 6.8 years ago by
him4u324
▴ 10
1
vote
2
replies
4.8k
views
rhdf5 package fails to install
rhdf5
hdf5
8.5 years ago
trombe.piju
• 0
14
votes
10
replies
4.8k
views
HDF5 reading speed
rhdf5
hdf5
updated 6.2 years ago by
Mike Smith
★ 6.5k • written 6.2 years ago by
felicien.meunier
▴ 40
2
votes
2
replies
3.4k
views
Problem with HDF5 and ncdfFlow
installation
dependency
library
hdf5
8.6 years ago
Ulrik Stervbo
▴ 30
1
vote
1
reply
3.4k
views
How can I add rows to a dataframe in an HDF5 file using rhdf5?
rhdf5
hdf5
updated 8.8 years ago by
Nathaniel Hayden
▴ 180 • written 8.8 years ago by
serefarikan
• 0
3
votes
8
replies
3.0k
views
Tutorial:
"developing" with HDF5Array
hdf5
DelayedArray
summarizedexperiment
Tutorial
7.2 years ago
Vincent J. Carey, Jr.
6.7k
1
vote
2
replies
3.0k
views
Unable to open hd5 file using rhdf5 but can list contents
hdf5
h5
rhdf5
updated 22 months ago by
Mike Smith
★ 6.5k • written 22 months ago by
dNand
• 0
0
votes
5
replies
2.8k
views
Load saved RangedSummarizedExperiment as Deseq2 dataset
deseq2
hdf5
rangedsummarizedexperiment
rnaseq
6.8 years ago
Jakob Petereit
• 0
3
votes
6
replies
2.3k
views
hdf5load equivalent for RHDF5
hdf5
rhdf5
hdf
updated 8.1 years ago by
Bernd Fischer
▴ 550 • written 8.1 years ago by
manfredodiporcia
• 0
2
votes
2
replies
2.1k
views
Suppressing rhdf5 error messages
rhdf5
hdf5
updated 8.8 years ago by
Bernd Fischer
▴ 550 • written 8.8 years ago by
Mike Smith
★ 6.5k
0
votes
1
reply
1.9k
views
phyloseq biom json format conversion needed to hdf5 format for qiime
biom
json
hdf5
qiime
phyloseq
updated 7.5 years ago by
Bernd Fischer
▴ 550 • written 7.5 years ago by
newmanss
• 0
2
votes
11
replies
1.8k
views
failure importing data with tximport with error information
software error
tximport
hdf5
updated 4.5 years ago by
Michael Love
41k • written 4.5 years ago by
me5537
▴ 10
1
vote
2
replies
1.8k
views
H5Sset_extent_simple is not exposed in rhdf5, what it means for datasets where dims != maxdims
rhdf5
hdf5
updated 9.4 years ago by
Bernd Fischer
▴ 550 • written 9.4 years ago by
Nathaniel Hayden
▴ 180
1
vote
2
replies
1.7k
views
API for Bioconductor
rhdf5
hdf5
dependencies
updated 7.8 years ago by
Mike Smith
★ 6.5k • written 7.8 years ago by
thabermann
• 0
0
votes
3
replies
1.3k
views
Rhdf5 C-library out of date
rhdf5
hdf5
updated 5.9 years ago by
Mike Smith
★ 6.5k • written 5.9 years ago by
channsoden
• 0
1
vote
1
reply
1.3k
views
Contradictory Messages from rhdf5
rhdf5
hdf5
updated 6.7 years ago by
Mike Smith
★ 6.5k • written 7.0 years ago by
Kipper Fletez-Brant
▴ 150
16 results • Page
1 of 1
Recent ...
Replies
Comment: How to tell and visualize up/down regulation of pathways from clusterprofiler gs
by
Guangchuang Yu
★ 1.2k
an example is also presented in <https://pubmed.ncbi.nlm.nih.gov/34557778/>.
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
Nothing would prevent you from using the `enrichGO` function (or any other function for over-representation analysis [ORA]) with only 14 ge…
Comment: Different Shrunk Log2FC according with reference
by
andrebolerbarros
▴ 20
Thanks @atpoint for your answer! The issue with that is then it severely hinders the possiblity of using `apeglm` shrinking approach, sinc…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
by
ATpoint
★ 4.0k
The error that is relevant is `Aborted (core dumped)`. This line 2890 refers to the C source code that throws the error, it is not relevant…
Answer: Different Shrunk Log2FC according with reference
by
ATpoint
★ 4.0k
Please see: https://support.bioconductor.org/p/p134551/ I asked basically the same before. In short, reference level might have an influ…
Votes
DEXSeq-Error in FUN(X[[i]], ...) : subscript out of bounds
Subset DEXSeqDataSet In DEXSeq
How to get all possible comparisons in DiffBind
Comment: get BM error
Answer: Citation for edgeR user guide
Awards
• All
Scholar
to
ATpoint
★ 4.0k
Popular Question
to
Gordon Smyth
50k
Popular Question
to
i.sudbery
▴ 40
Scholar
to
Michael Love
41k
Popular Question
to
shepherl
3.8k
Locations
• All
India,
3 minutes ago
South Korea,
6 minutes ago
France,
9 minutes ago
Belgium,
10 minutes ago
Hong Kong,
19 minutes ago
Traffic: 864 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6