Bioconductor Hg38

Showing : hg38 • reset

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2.6k

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salmon hg38 tximport tx2gene.csv

updated 7.1 years ago by Michael Love 41k • written 7.1 years ago by seb.boegel • 0

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2.4k

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edaseq normalization hg38 biomart org.db

updated 6.4 years ago by davide risso ▴ 950 • written 6.4 years ago by mark.ebbert • 0

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2.2k

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rsubread ncbi GRCh38 hg38

updated 7.5 years ago by Wei Shi ★ 3.6k • written 7.5 years ago by jan.soderman • 0

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976

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annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38

updated 4.2 years ago by kayla.interdonato ▴ 160 • written 4.2 years ago by jam526 • 0

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1.0k

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Annotation variation HG38

updated 3.4 years ago by James W. MacDonald 65k • written 3.5 years ago by Emanuele • 0

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1.5k

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featurecounts hg38

6.9 years ago raf4 ▴ 20

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687

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hg38 genicannotations

updated 2.6 years ago by James W. MacDonald 65k • written 2.6 years ago by bundo • 0

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349

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SeqSQC hg38

updated 6 months ago by James W. MacDonald 65k • written 6 months ago by isml2688 • 0

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2.1k

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bsgenome hg38 r version 3.1.2

updated 8.6 years ago by James W. MacDonald 65k • written 8.6 years ago by kylvalda • 0

9 results • Page 1 of 1

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Answer: OrgDb for maize by Guido Hooiveld ★ 3.9k

I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …

Comment: Theoretical WGCNA Question by Garrett • 0

Thanks Peter!

Comment: FGSEA pre-ranked input in increasing order or decreasing by sropri • 0

Thank you!

Comment: FGSEA pre-ranked input in increasing order or decreasing by alserg ▴ 240

They are reorder in the decreasing order.

Comment: significant difference of p-values with dream() after updating VariancePartition by Le • 0

Thanks for your reply @gabrielhoffman ! I've been trying to isolate the changes, and v1.32.5 had the same results as v1.33.1 while v1.30.0…

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Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

Comment: DEXSeq DEXSeqDataSet count matrix duplication

Comment: Error in champ.load(): The following specified files do not exist

Answer: Error in read.metharray(basenames = files, extended = extended, verbose = verbos

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Scholar to Peter Hickey ▴ 740