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Answer: DESeq errpr in normalizePath by Michael Love 37k
Can you show the command that produced this error? Also can you run `traceback()` after the error?
Comment: paired samples, comparing expression given a continuous variable by naz • 0
Thank you for your help, Dr. Smyth. I appreciate your insights and I will adjust my analysis as you recommend.
Answer: paired samples, comparing expression given a continuous variable by Gordon Smyth 46k
You are including too many terms in the linear model. TimePoint and Total.Score give almost the same information. You can include either on…
Comment: I cannot install "microbiome" by Marcel Ramos 570
Hi @61191329 , Unfortunately, I am unable to reproduce the issue on Windows. Please provide additional information, namely `BiocManager::v…
Comment: DESeq2 LFC changes sign after adjusting for surrogates by Marie • 0
Thanks a lot!
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Answer: lapply for GRanges
Answer: paired samples, comparing expression given a continuous variable
Answer: paired samples, comparing expression given a continuous variable
A: log2FoldChange calculation in DESeq2 output
A: DESeq2 baseMean counts
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