Showing : hgu133plus2 • reset
0
votes
9
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1.1k
views
Appropriate Probe annotation for HT-HGU133A chips
hgu133a hgu133plus2 cdf probe hgu133a hgu133plus2 cdf probe
updated 13.9 years ago by 62k • written 13.9 years ago by ▴ 30
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votes
7
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1.3k
views
Missing GeneSymbol and Name information in TopTable
Annotation hgu133plus2 annaffy affylmGUI Annotation hgu133plus2 annaffy affylmGUI
updated 13.6 years ago by ★ 7.2k • written 13.6 years ago by ▴ 40
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votes
7
replies
937
views
Changes in annotations?
Annotation hgu133plus2 Biobase annotate Annotation hgu133plus2 Biobase annotate
13.7 years ago Alex Sanchez ▴ 90
0
votes
7
replies
925
views
Affy chip annotation changes
Annotation hgu133plus2 probe Annotation hgu133plus2 probe
updated 12.4 years ago by 62k • written 12.4 years ago by ▴ 240
0
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7
replies
1.3k
views
annaffy annotation problem (hgu133plus2)
Annotation hgu133plus2 probe annotate AnnBuilder Annotation hgu133plus2 probe annotate
updated 18.0 years ago by ▴ 170 • written 18.0 years ago by ▴ 430
0
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6
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1.1k
views
load failed for 'Rlibstree'
hgu133plus2 rtracklayer hgu133plus2 rtracklayer
updated 13.0 years ago by ★ 7.4k • written 13.0 years ago by ★ 1.1k
0
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6
replies
1.2k
views
outlier probes detection
hgu133plus2 hgu133plus2
updated 10.9 years ago by ▴ 210 • written 10.9 years ago by ▴ 240
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votes
5
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849
views
Search queries with biomaRt does not align with online queries via ensembl
GO hgu133plus2 biomaRt GO hgu133plus2 biomaRt
updated 13.1 years ago by ▴ 570 • written 13.1 years ago by ▴ 400
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5
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1.9k
views
ReadAffy() Error - 2 Platforms in one file
hgu133a hgu133b hgu133plus2 hgu95a hgu95av2 hu6800 u133x3p hgu133a hgu133b hgu133plus2
updated 7.0 years ago by ▴ 110 • written 10.9 years ago by ▴ 760
0
votes
5
replies
1.9k
views
genefilter vs limma - many probes filtered
hgu133plus2 limma hgu133plus2 limma
updated 8.8 years ago by 47k • written 8.8 years ago by ★ 12k
0
votes
5
replies
1.0k
views
multiple locations for probeset in hgu133plus2CHRLOC vs. UCSC PSL data
Alignment Annotation hgu133plus2 Alignment Annotation hgu133plus2
updated 14.3 years ago by 16k • written 14.3 years ago by ▴ 10
0
votes
5
replies
810
views
Problems with homology packages
hgu133plus2 hgu133plus2
17.7 years ago Bosotti, Roberta [Nervianoms] ▴ 120
0
votes
5
replies
997
views
Annotation of Affymetrix hgu133plus2 chip
Annotation hgu133plus2 probe Annotation hgu133plus2 probe
updated 18.6 years ago by ★ 5.5k • written 18.6 years ago by ▴ 430
1
vote
4
replies
1.6k
views
hgu133plus2cdf cant download
normalization hgu133plus2
5.5 years ago marion.ryan • 0
5
votes
4
replies
2.4k
views
How to use custom cdf "hgu133plus2hsentrezgcdf"?
customcdf affymetrix microarrays hgu133plus2 affy
5.2 years ago rahil ▴ 30
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4
replies
1.5k
views
hgu133plus2cdfSYMBOL not found
Cancer hgu133plus2 probe affy Cancer hgu133plus2 probe affy
updated 13.3 years ago by ▴ 630 • written 13.3 years ago by ▴ 60
0
votes
4
replies
1.1k
views
possible bug in getBM{biomaRt}
hgu133plus2 hgu133plus2
updated 14.0 years ago by ▴ 660 • written 14.0 years ago by ▴ 30
0
votes
4
replies
1.3k
views
annotation package ?
Annotation hgu133plus2 Annotation hgu133plus2
updated 11.6 years ago by ★ 7.2k • written 11.6 years ago by ▴ 380
0
votes
4
replies
3.2k
views
Analysis of Affymetrix Human Gene 2.0 ST arrays
Annotation Normalization hgu133plus2 affy PROcess Category Annotation Normalization affy
updated 9.3 years ago by 62k • written 9.3 years ago by ★ 12k
0
votes
4
replies
1.3k
views
about columm "size" in out of hyperGtest ( Gostat package)
GO hgu133plus2 affy GO hgu133plus2 affy
updated 6.1 years ago by ▴ 10 • written 13.8 years ago by ▴ 430
0
votes
4
replies
647
views
Annotation packages: Which Unigene Release?
hgu133plus2 hgu133plus2
updated 17.8 years ago by ★ 2.9k • written 17.8 years ago by ▴ 310
0
votes
4
replies
979
views
Question about hgu133plus2cdf?
hgu133plus2 cdf affy hgu133plus2 cdf affy
11.0 years ago Fabrice Tourre ▴ 970
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votes
4
replies
1.1k
views
Problems with hgu133plus2
Annotation hgu133plus2 Annotation hgu133plus2
18.1 years ago Vitalina Komashko ▴ 30
0
votes
4
replies
2.1k
views
GEOquery loading error
hgu133plus2 GEOquery BiocInstaller hgu133plus2 GEOquery BiocInstaller
updated 10.8 years ago by ★ 8.2k • written 10.8 years ago by ★ 12k
0
votes
4
replies
1.8k
views
disagreement between biomaRt and topGO
GO hgu133plus2 annotate geneplotter graph Rgraphviz PROcess goTools biomaRt Category GO
updated 15.5 years ago by ▴ 500 • written 15.5 years ago by ★ 1.4k
0
votes
4
replies
961
views
hgu133plus2 GO issues
Annotation GO hgu133plus2 probe Annotation GO hgu133plus2 probe
updated 16.9 years ago by 62k • written 16.9 years ago by ▴ 320
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votes
4
replies
3.9k
views
error in sort.int , 'x' must be atomic in affy::boxplot
affy package boxplot hgu133plus2 oligo package
updated 6.0 years ago by 62k • written 6.0 years ago by ▴ 840
0
votes
4
replies
885
views
Affy output
Annotation GO hgu133a2 hgu133plus2 cdf Annotation GO hgu133a2 hgu133plus2 cdf
13.8 years ago Sarmah, Chintanu Kumar ▴ 70
0
votes
3
replies
2.0k
views
AFFX-BioB-3_at annotation
hgu133plus2 mouse4302 hgu133plus2 mouse4302
17.0 years ago Wu, Xiwei ▴ 350
0
votes
3
replies
841
views
equivalent probes between microarray platforms
hgu133plus2 hu6800 hgu133plus2 hu6800
updated 18.4 years ago by ▴ 10 • written 18.4 years ago by ▴ 140
1
vote
3
replies
976
views
how often are annotation packages updated (with respect to hgu133a.db and hgu133plus2.db)
Annotation hgu133a hgu133plus2 probe Annotation hgu133a hgu133plus2 probe
updated 13.9 years ago by 6.5k • written 13.9 years ago by ▴ 350
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votes
3
replies
3.1k
views
Unambiguously mapping of affy IDs to gene symbols using hgu133plus2.db
Annotation hgu133plus2 biomaRt Annotation hgu133plus2 biomaRt
updated 12.5 years ago by ★ 7.2k • written 12.5 years ago by ▴ 170
0
votes
3
replies
978
views
Comparison of diff. t-statistics, Limma and rowttests
hgu133plus2 affy limma gcrma hgu133plus2 affy limma gcrma
14.7 years ago Boel Brynedal ▴ 200
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votes
3
replies
808
views
KEGGHyperGParams variable "mouse4302PATH2EG" was not found
Annotation GO hgu133plus2 moe430b mouse4302 Annotation GO hgu133plus2 moe430b mouse4302
updated 13.9 years ago by ★ 7.2k • written 13.9 years ago by ▴ 170
0
votes
3
replies
855
views
quick question about romer results
hgu133plus2 limma hgu133plus2 limma
updated 12.3 years ago by ▴ 190 • written 12.3 years ago by ▴ 930
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votes
3
replies
1.9k
views
BiocLite eror
Microarray hgu133plus2 Microarray hgu133plus2
updated 9.0 years ago by ★ 8.2k • written 9.0 years ago by ▴ 10
0
votes
3
replies
847
views
R crashes after image array plots hgu133plus2 in R2.6.0
GUI hgu133plus2 affy limma affylmGUI GUI hgu133plus2 affy limma affylmGUI
updated 15.4 years ago by 25k • written 15.4 years ago by ★ 2.0k
0
votes
3
replies
786
views
Error in summary(hyperGtest)
Annotation GO hgu133plus2 Annotation GO hgu133plus2
updated 13.7 years ago by 62k • written 13.7 years ago by ▴ 270
0
votes
3
replies
1.5k
views
Affymetrix ReadAffy() can't read my CEL file
microarray affy cancer hgu133plus2 package
updated 8.1 years ago by 62k • written 8.1 years ago by ▴ 10
0
votes
3
replies
663
views
Problem with hgu133plus2.db package
GO hgu133plus2 GO hgu133plus2
updated 13.8 years ago by 25k • written 13.8 years ago by ▴ 50
0
votes
3
replies
1.1k
views
GOstats - internal filtering?
Annotation GO hgu133plus2 GOstats Category Annotation GO hgu133plus2 GOstats Category
updated 10.9 years ago by 62k • written 10.9 years ago by ▴ 120
0
votes
3
replies
1.4k
views
Can BioC still convert exprSet to ExpressionSet?
hgu133a hgu133plus2 mouse4302 convert hgu133a hgu133plus2 mouse4302 convert
updated 13.9 years ago by 25k • written 13.9 years ago by ▴ 100
0
votes
3
replies
1.1k
views
Using biomaRt to check probe locations
Annotation hgu133plus2 probe biomaRt Annotation hgu133plus2 probe biomaRt
updated 14.6 years ago by 62k • written 14.6 years ago by ▴ 100
0
votes
3
replies
880
views
problem about hgu133plus2 annotation
hgu133plus2 hgu133plus2
updated 12.7 years ago by 62k • written 12.7 years ago by ▴ 10
0
votes
3
replies
1.2k
views
Problem with KEGGgraph
Organism hgu133plus2 KEGGgraph Organism hgu133plus2 KEGGgraph
updated 13.4 years ago by ▴ 570 • written 13.4 years ago by ▴ 270
0
votes
3
replies
2.3k
views
How to get ENTREZID from Gene symbol in bioconductor
hgu133plus2 hgu133plus2
updated 15.0 years ago by ★ 7.2k • written 15.0 years ago by ▴ 600
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votes
3
replies
1.1k
views
combining hgu133a and hgu133b
hgu133a hgu133b hgu133plus2 hgu133a hgu133b hgu133plus2
10.9 years ago Mayte Suarez-Farinas ▴ 510
0
votes
3
replies
2.1k
views
HUgene 2.0 analyses with CEL files, oligo package
microarray annotation hgu133plus2 hugene20
8.0 years ago kanacska ▴ 10
0
votes
2
replies
815
views
annotation
hgu133plus2 mgu74av2 annotate hgu133plus2 mgu74av2 annotate
updated 17.0 years ago by ▴ 300 • written 17.0 years ago by ▴ 320
0
votes
2
replies
1.3k
views
Package installation problem...
hgu133plus2 cdf hgu133plus2 cdf
updated 17.0 years ago by 62k • written 17.0 years ago by ▴ 10
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Comment: Time-course, comparison of two groups by boczniak767 ▴ 720
I'd like to test: 1. Are there differences between treatment (cold vs regrowth) time profiles for each line? 2. Do lines react differentl…
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Good boxers who are fighting be found on soccer-tips.ru click and you will be extremely sated.
Comment: Time-course, comparison of two groups by Gordon Smyth 47k
What hypothesis are you trying to test?
Answer: Limma for Fluidigm high throughput PCR by Gordon Smyth 47k
1. Yes, but I would also considering setting `trend=TRUE` in the `eBayes` step. 2. "did not work" and "no expression" are different things.…
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The values in the file appear to be estimated read counts, after some modification. However the values include both negative values and NAs…
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Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va
A: Pathway analysis of differentially methylated CpGs
Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va
Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va
Answer: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va
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