Showing : hgu133plus2 • reset
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rtracklayer bug? cannot coerce type 'externalptr' to vector of type 'double' in browseGenome call
hgu133plus2 rtracklayer hgu133plus2 rtracklayer
16.8 years ago Paul Shannon ★ 1.1k
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rtracklayer bug? cannot coerce type 'externalptr' to vector of type 'double' in browseGenome call
hgu133plus2 rtracklayer hgu133plus2 rtracklayer
16.8 years ago Paul Shannon ★ 1.1k
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1
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Combine hgu133a&b and hgu133plus2
Normalization hgu133plus2 Normalization hgu133plus2
updated 16.8 years ago by ▴ 40 • written 16.8 years ago by ▴ 90
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SAM warning
Biophysics Alignment Annotation Normalization Cancer hgu133plus2 probe affy vsn MBCB vsn
16.8 years ago elliot harrison ▴ 230
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multiple locations for probeset in hgu133plus2CHRLOC vs. UCSC PSL data
Alignment Annotation Cancer hgu133plus2 probe affy Biostrings Alignment Annotation Cancer
16.8 years ago rgentleman ★ 5.5k
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GOstats: hyperGTest for KEGG with org.Sc.sgd.db
Annotation GO Yeast hgu133a hgu133b hgu133plus2 hgu95a hgu95av2 hgug4110b hgug4112a GO
16.8 years ago Paul Evans ▴ 180
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simpleaffy with hgu133plus2
hgu133plus2 simpleaffy hgu133plus2 simpleaffy
16.9 years ago dorothyc ▴ 140
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Loading problem with Rlibstree and microRNA packages on MacOS X 10.4
GUI Cancer Breast hgu133plus2 PROcess rtracklayer microRNA GUI Cancer Breast hgu133plus2
17.0 years ago Steven McKinney ▴ 310
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5
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1.8k
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multiple locations for probeset in hgu133plus2CHRLOC vs. UCSC PSL data
Alignment Annotation hgu133plus2 Alignment Annotation hgu133plus2
updated 17.0 years ago by 16k • written 17.0 years ago by ▴ 10
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1
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2.1k
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Bug in topGO-package [topGO_1.10.0: GenTable-function]
GO hgu133plus2 siggenes GO hgu133plus2 siggenes
updated 17.0 years ago by ▴ 400 • written 17.0 years ago by ▴ 330
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2
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hyperGTest
GO hgu133a hgu133plus2 hgu95av2 GO hgu133a hgu133plus2 hgu95av2
updated 17.1 years ago by ★ 5.5k • written 17.1 years ago by ★ 1.2k
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biomart doesn't annotate all the genes queried -CEACAM6
Cancer hgu133plus2 annotate affy biomaRt Cancer hgu133plus2 annotate affy biomaRt
17.2 years ago Julian Lee ▴ 140
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Link to picture: Comparison of diff. t-statistics, Limma and rowttests
hgu133plus2 affy limma gcrma hgu133plus2 affy limma gcrma
17.3 years ago Boel Brynedal ▴ 200
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3
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1.7k
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Using biomaRt to check probe locations
Annotation hgu133plus2 probe biomaRt Annotation hgu133plus2 probe biomaRt
updated 17.3 years ago by 68k • written 17.3 years ago by ▴ 100
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same value in an affy exprset
hgu133plus2 gcrma hgu133plus2 gcrma
updated 17.3 years ago by 68k • written 17.3 years ago by ▴ 10
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Link to picture: Comparison of diff. t-statistics, Limma and rowttests
hgu133plus2 affy limma gcrma hgu133plus2 affy limma gcrma
17.3 years ago Boel Brynedal ▴ 200
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3
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1.5k
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Comparison of diff. t-statistics, Limma and rowttests
hgu133plus2 affy limma gcrma hgu133plus2 affy limma gcrma
17.3 years ago Boel Brynedal ▴ 200
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971
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dev2bitmap error, 'gs' cannot be found
hgu133plus2 Category hgu133plus2 Category
17.3 years ago Boel Brynedal ▴ 200
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3
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3.0k
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How to get ENTREZID from Gene symbol in bioconductor
hgu133plus2 hgu133plus2
updated 17.7 years ago by ★ 7.2k • written 17.7 years ago by ▴ 600
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1
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998
views
Mapping Affy probes to OperonID or ensemblID
Cancer hgu133plus2 Cancer hgu133plus2
updated 18.0 years ago by 21k • written 18.0 years ago by ▴ 140
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3
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1.5k
views
R crashes after image array plots hgu133plus2 in R2.6.0
GUI hgu133plus2 affy limma affylmGUI GUI hgu133plus2 affy limma affylmGUI
updated 18.0 years ago by 25k • written 18.0 years ago by ★ 2.0k
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937
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Affymetrix quality control metrics with simpleaffy
GO hgu133plus2 affy GO hgu133plus2 affy
18.1 years ago Richard Friedman ★ 2.0k
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problem running dev version of GCRMA
hgu133plus2 cdf Biobase affy affyio hgu133plus2 cdf Biobase affy affyio
18.2 years ago Martin Morgan 25k
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2
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RMA of CEL files from different chip types
hgu133a hgu133plus2 hgu133a hgu133plus2
updated 18.2 years ago by ▴ 190 • written 18.2 years ago by ▴ 10
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disagreement between biomaRt and topGO
GO hgu133plus2 annotate geneplotter graph Rgraphviz PROcess goTools biomaRt Category GO
updated 18.2 years ago by ▴ 500 • written 18.2 years ago by ★ 1.4k
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1
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1.4k
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Question about inconsistent gene expression
Microarray Cancer hgu133plus2 probe affy limma gcrma Microarray Cancer hgu133plus2 probe
updated 18.2 years ago by ▴ 120 • written 18.2 years ago by ▴ 40
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2
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1.4k
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Questions about gene identifiers and probesets regulation
Microarray hgu133plus2 limma Microarray hgu133plus2 limma
updated 18.3 years ago by 68k • written 18.3 years ago by ▴ 40
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894
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hgu133plus2 normalization
Microarray hgu133plus2 PROcess Microarray hgu133plus2 PROcess
18.6 years ago Bin Zheng ▴ 10
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976
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dChip v li.wong() (Was: Re: warnings from li wong summary method in expresso)
Microarray Normalization Preprocessing Cancer hgu133plus2 probe affy limma PROcess Cancer
18.8 years ago Henrik Bengtsson ★ 2.4k
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786
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Does anyone have a recent annotation for hgu133plus2 ??
Annotation hgu133plus2 AnnBuilder Annotation hgu133plus2 AnnBuilder
18.9 years ago Marco Zucchelli ▴ 10
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1
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789
views
Question on read.probematix
hgu133plus2 hgu133plus2
updated 19.2 years ago by 68k • written 19.2 years ago by ▴ 100
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2
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1.2k
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Question on AffyBatch
hgu133plus2 probe hgu133plus2 probe
updated 19.2 years ago by ★ 13k • written 19.2 years ago by ▴ 100
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2
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1.2k
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vector allocation error
hgu133plus2 gcrma hgu133plus2 gcrma
updated 19.4 years ago by ▴ 60 • written 19.4 years ago by ▴ 50
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771
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alternative CDF
hgu133a hgu133plus2 cdf hgu133a hgu133plus2 cdf
19.5 years ago Tarca, Adi ▴ 570
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885
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problem with moe430a version 1.12.0?
hgu133a hgu133plus2 moe430a moe430b rae230b probe hgu133a hgu133plus2 moe430a moe430b
19.5 years ago MARIA STALTERI ▴ 160
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4
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1.6k
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hgu133plus2 GO issues
Annotation GO hgu133plus2 probe Annotation GO hgu133plus2 probe
updated 19.6 years ago by 68k • written 19.6 years ago by ▴ 320
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3
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3.3k
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AFFX-BioB-3_at annotation
hgu133plus2 mouse4302 hgu133plus2 mouse4302
19.6 years ago Wu, Xiwei ▴ 350
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2
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1.2k
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annotation
hgu133plus2 mgu74av2 annotate hgu133plus2 mgu74av2 annotate
updated 19.7 years ago by ▴ 300 • written 19.7 years ago by ▴ 320
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2
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1.8k
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Package installation problem...
hgu133plus2 cdf hgu133plus2 cdf
updated 19.7 years ago by 68k • written 19.7 years ago by ▴ 10
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1
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938
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annotation hgu133plus2 problem,
hgu133plus2 hgu133plus2
updated 19.8 years ago by 68k • written 19.8 years ago by ▴ 360
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938
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hgu133plus2cdf
hgu133plus2 cdf hgu133plus2 cdf
19.8 years ago Seth Falcon ★ 7.4k
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961
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want to compare hgu133a and hgu133plus2
hgu133a hgu133plus2 affy Resourcerer hgu133a hgu133plus2 affy Resourcerer
20.1 years ago Dick Beyer ★ 1.4k
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2
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909
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adding annotation to exprSet
Annotation hgu133plus2 annotate affy limma Annotation hgu133plus2 annotate affy limma
20.3 years ago Andreas Zankl ▴ 80
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5
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1.4k
views
Problems with homology packages
hgu133plus2 hgu133plus2
20.4 years ago Bosotti, Roberta [Nervianoms] ▴ 120
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1
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1.3k
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annotation problem with hgu133plus2
Annotation GO hgu133plus2 cdf annotate affy siggenes annaffy Annotation GO hgu133plus2
20.5 years ago Yanqin Yang ▴ 250
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4
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1.3k
views
Annotation packages: Which Unigene Release?
hgu133plus2 hgu133plus2
updated 20.5 years ago by ★ 2.9k • written 20.5 years ago by ▴ 310
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1.4k
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error with plot in simpleaffy
hgu133plus2 probe simpleaffy hgu133plus2 probe simpleaffy
20.6 years ago Larry La Pointe ▴ 60
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2.4k
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annaffy annotation problem (hgu133plus2)
Annotation hgu133plus2 probe annotate AnnBuilder Annotation hgu133plus2 probe annotate
updated 20.6 years ago by ▴ 170 • written 20.6 years ago by ▴ 430
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1.0k
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Follow-up to: [R] Annotation metadata "kills" help.search
Annotation GO hgu133plus2 reposTools Annotation GO hgu133plus2 reposTools
20.6 years ago Gerard Tromp ▴ 10
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1.7k
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Problems with hgu133plus2
Annotation hgu133plus2 Annotation hgu133plus2
20.7 years ago Vitalina Komashko ▴ 30
157 results • Page 3 of 4
Recent ...
Replies
Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Matthew Thornton ▴ 380
WOW! Thank you so much for the information. I will do this.
Comment: "Watched Tags" are being erased rather than updated by RalphSavage99 • 0
Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112
Answer: Add additional maintainer for MOFA2 by shepherl 4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Votes
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
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Scholar to shepherl 4.2k
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