Showing : hgu95av2 • reset
0
votes
6
replies
1.3k
views
serious problem with GOstats package
GO hgu95av2 GOstats GO hgu95av2 GOstats
updated 11.0 years ago by ★ 8.2k • written 11.0 years ago by ▴ 430
0
votes
4
replies
1.1k
views
Recent changes to Bioconductor packages
Normalization hgu95a hgu95av2 annotate reposTools limma Normalization hgu95a hgu95av2
21.0 years ago • updated 20.9 years ago madman@jimmy.harvard.edu ▴ 850
0
votes
6
replies
1.4k
views
Many missing GO terms from GOHyperG call using mgu74av2
GO Survival hgu95av2 mgu74av2 Ruuid annotate multtest affy graph annaffy RBGL GOstats
updated 18.8 years ago by ★ 7.4k • written 18.8 years ago by ★ 1.4k
0
votes
3
replies
1.0k
views
Missing function locuslinkQuery and locuslinkBYID in annotate 1.18.0
GO hgu95av2 Biobase annotate GO hgu95av2 Biobase annotate
updated 15.5 years ago by ★ 7.2k • written 15.5 years ago by ▴ 300
0
votes
7
replies
1.7k
views
problem with GOstats, developmental version?
GO Survival hgu95av2 annotate affy affydata graph Rgraphviz limma gcrma matchprobes GO
updated 16.6 years ago by ★ 7.4k • written 16.6 years ago by ★ 2.2k
0
votes
6
replies
1.4k
views
mas5 update.default problem
hgu95av2 cdf affy affyio hgu95av2 cdf affy affyio
updated 16.9 years ago by ★ 7.4k • written 16.9 years ago by ▴ 190
0
votes
3
replies
853
views
Problems using GO 1.6.0 in Windows
GO hgu133a hgu95av2 GO hgu133a hgu95av2
updated 19.9 years ago by ★ 2.9k • written 19.9 years ago by ▴ 550
0
votes
2
replies
1.6k
views
GEOquery and GEO issues
hgu95a hgu95av2 GEOquery hgu95a hgu95av2 GEOquery
18.3 years ago Christian.Stratowa@vie.boehringer-ingel… ▴ 270
0
votes
3
replies
2.4k
views
How to carry out Gene Set Enrichment Analysis(GSEA) on an ordered list of Entrezgene ids?
Proteomics hgu95av2 GSEABase Proteomics hgu95av2 GSEABase
15.8 years ago anna freni sterrantino ▴ 120
0
votes
2
replies
4.8k
views
How to go from affymetrix to Ensembl transcript IDs
hgu95av2 affy biomaRt hgu95av2 affy biomaRt
updated 15.0 years ago by ★ 13k • written 15.0 years ago by ▴ 300
0
votes
2
replies
1.2k
views
AnnBuilder questions
Annotation GO Yeast hgu95av2 probe geneplotter AnnBuilder Annotation GO Yeast hgu95av2
updated 16.7 years ago by ★ 7.2k • written 16.7 years ago by ▴ 30
2
votes
3
replies
1.1k
views
Creating Annotation package for GPL10427
Annotation hgu95av2 Annotation hgu95av2
updated 10.6 years ago by 65k • written 10.6 years ago by ★ 13k
0
votes
3
replies
1.2k
views
Annotation of U95av2 array
Microarray Genetics Annotation GO Cancer hgu95av2 probe affy AnnBuilder PROcess Genetics
updated 17.0 years ago by ▴ 870 • written 17.0 years ago by 65k
0
votes
4
replies
2.3k
views
HGU95a and HGU95av2 with gcrma
hgu95a hgu95av2 cdf gcrma hgu95a hgu95av2 cdf gcrma
updated 19.4 years ago by ★ 13k • written 19.4 years ago by ▴ 80
0
votes
2
replies
986
views
GOstats and library ath1121501
ath1121501 hgu95av2 GOstats ath1121501 hgu95av2 GOstats
updated 17.7 years ago by ★ 7.4k • written 17.7 years ago by ▴ 70
0
votes
7
replies
1.4k
views
Rkeys function from AnnotationDbi returns all Rkeys for a subset
hgu95av2 hgu95av2
updated 15.4 years ago by 65k • written 15.4 years ago by ▴ 110
0
votes
3
replies
822
views
GO with mu11ksuba(b)
GO hgu95av2 mu11ksuba cdf GO hgu95av2 mu11ksuba cdf
updated 19.0 years ago by ★ 7.4k • written 19.0 years ago by ▴ 300
0
votes
5
replies
2.2k
views
ReadAffy() Error - 2 Platforms in one file
hgu133a hgu133b hgu133plus2 hgu95a hgu95av2 hu6800 u133x3p hgu133a hgu133b hgu133plus2
updated 8.1 years ago by ▴ 110 • written 12.0 years ago by ▴ 760
0
votes
2
replies
1.5k
views
problem loading affycoretools
Survival hgu95av2 Biobase Ruuid annotate genefilter multtest affydata graph limma gcrma
17.7 years ago Jenny Drnevich ★ 2.2k
0
votes
2
replies
1.1k
views
problem with annaffy aafFunction function
GO hgu95av2 rat2302 Biobase annotate reposTools affy annaffy GO hgu95av2 rat2302 affy
updated 18.5 years ago by 65k • written 18.5 years ago by ▴ 890
0
votes
1
reply
1.7k
views
Rv1.91 or v2.0.0 on MacOS 10.3.5
SAGE GO Kidney hgu95av2 hu6800 rae230a cdf Biobase Ruuid DynDoc annotate edd multtest
updated 19.5 years ago by ★ 5.5k • written 19.5 years ago by ▴ 100
0
votes
1
reply
1.2k
views
hyperGTest Error in sqliteExecStatement...
GO hgu95av2 GOstats GO hgu95av2 GOstats
updated 16.0 years ago by ★ 5.5k • written 16.0 years ago by ▴ 10
0
votes
1
reply
1.0k
views
Querying PubMed Database
hgu95av2 rae230a annotate affy affydata hgu95av2 rae230a annotate affy affydata
updated 20.6 years ago by 6.7k • written 20.6 years ago by ▴ 60
0
votes
1
reply
699
views
ReadAffy problem sampleNames + hgu95av2
hgu95av2 Biobase affy hgu95av2 Biobase affy
19.9 years ago Adaikalavan Ramasamy ★ 1.8k
0
votes
1
reply
619
views
hgu95av2
hgu95av2 hgu95av2
updated 19.3 years ago by ★ 13k • written 19.3 years ago by ★ 1.3k
0
votes
1
reply
1.0k
views
Error with library hgu95av2
hgu95av2 hgu95av2
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 40
0
votes
1
reply
1.1k
views
simLL method in GOstats to measure distances between yeast genes
Yeast hgu95av2 ygs98 Yeast hgu95av2 ygs98
updated 18.9 years ago by ★ 5.5k • written 18.9 years ago by ▴ 100
0
votes
1
reply
649
views
Category package problems with Vignette documentation
Microarray hgu95av2 Category Microarray hgu95av2 Category
updated 18.9 years ago by ★ 5.5k • written 18.9 years ago by ▴ 20
0
votes
1
reply
886
views
rbind in annaffy problem
GO hgu95av2 rat2302 cdf annotate affy graph annaffy RBGL GOstats biomaRt GO hgu95av2
updated 18.4 years ago by 65k • written 18.4 years ago by ▴ 890
0
votes
1
reply
1.3k
views
Bioconductor 2.1 is released
SNP Microarray SAGE Annotation Bayesian Regression GUI CGH hgu95av2 graph Rgraphviz SNP
16.6 years ago Hervé Pagès 16k
0
votes
1
reply
945
views
ExpressionSet class and problems with phenotype and metadata matrices
Annotation Clustering hgu95av2 Annotation Clustering hgu95av2
updated 16.2 years ago by 65k • written 16.2 years ago by ▴ 60
0
votes
1
reply
1.4k
views
GSEABase error in parsing msigdb_v2.5.xml
GO Infrastructure hgu95av2 Biobase Ruuid AnnotationDbi GO Infrastructure hgu95av2 Biobase
updated 16.0 years ago by 25k • written 16.0 years ago by ▴ 130
0
votes
1
reply
854
views
How to load annotations for pkgENTREZID, pkgGENENAME dynamically?
Cancer hgu95av2 affy Cancer hgu95av2 affy
updated 15.6 years ago by ▴ 360 • written 15.6 years ago by 25k
0
votes
2
replies
1.2k
views
GeneR fail to compile
hgu95av2 GeneR hgu95av2 GeneR
updated 15.6 years ago by ★ 5.5k • written 15.6 years ago by ▴ 120
0
votes
1
reply
826
views
Missing function locuslinkQuery and locuslinkBYID in annotate 1.18.0
GO hgu95av2 Biobase annotate GO hgu95av2 Biobase annotate
updated 15.6 years ago by ★ 7.2k • written 15.6 years ago by ▴ 300
0
votes
2
replies
948
views
hyperGTest
GO hgu133a hgu133plus2 hgu95av2 GO hgu133a hgu133plus2 hgu95av2
updated 15.5 years ago by ★ 5.5k • written 15.5 years ago by ★ 1.2k
0
votes
8
replies
1.7k
views
Annotation packages
Annotation GO hgu95av2 affy limma Annotation GO hgu95av2 affy limma
updated 15.5 years ago by 21k • written 15.5 years ago by ▴ 350
0
votes
1
reply
918
views
browseGenome width question (rtracklayer)
GO hgu95av2 GO hgu95av2
updated 15.5 years ago by ▴ 620 • written 15.5 years ago by ★ 1.1k
0
votes
1
reply
1.2k
views
GOstats: HyperGTest for KEGG
Annotation GO Yeast hgu133a hgu133b hgu133plus2 hgu95a hgu95av2 hgug4110b hgug4112a GO
updated 15.2 years ago by ★ 7.2k • written 15.2 years ago by ▴ 180
0
votes
1
reply
1.0k
views
extracting all GO terms from GOHyperGResult object?
Annotation GO hgu95av2 GOstats Annotation GO hgu95av2 GOstats
updated 14.3 years ago by ▴ 610 • written 14.3 years ago by ★ 2.0k
0
votes
1
reply
1.5k
views
CNV analysis with cghMCR/CNTools
GO CGH hgu133a hgu95av2 GO CGH hgu133a hgu95av2
updated 14.2 years ago by ★ 2.9k • written 14.3 years ago by ★ 1.1k
0
votes
1
reply
1.5k
views
KEGGSOAP, hgu95av2.db: limited functionality
Pathways hgu95av2 probe KEGGSOAP Pathways hgu95av2 probe KEGGSOAP
updated 14.2 years ago by ★ 7.2k • written 14.2 years ago by ▴ 70
0
votes
1
reply
1.1k
views
filtering in GSEABase package
GO hgu95av2 mouse4302 PROcess Category GO hgu95av2 mouse4302 PROcess Category
updated 14.1 years ago by ▴ 610 • written 14.1 years ago by ▴ 190
0
votes
1
reply
1.2k
views
GSEABase and Broad Inst Sets
Annotation hgu133plus2 hgu95av2 GSEABase Annotation hgu133plus2 hgu95av2 GSEABase
updated 13.8 years ago by 25k • written 13.8 years ago by ▴ 930
0
votes
13
replies
2.2k
views
Hypergeometric test with Disease Ontology
GO hgu95av2 GO hgu95av2
updated 13.2 years ago by ▴ 300 • written 13.2 years ago by ▴ 60
0
votes
1
reply
902
views
Use of createSimpleBimap
hgu95av2 AnnotationDbi hgu95av2 AnnotationDbi
updated 13.1 years ago by ★ 4.2k • written 13.1 years ago by ★ 1.1k
0
votes
1
reply
1.3k
views
creating a UniprotIdentifier within GSEABase
Annotation Cancer hgu95av2 convert GSEABase Annotation Cancer hgu95av2 convert GSEABase
updated 12.7 years ago by 25k • written 12.7 years ago by ▴ 910
0
votes
1
reply
3.5k
views
problems generating a gene2GOlist in topGO
Genetics Annotation GO hgu95av2 convert biomaRt topGO Genetics Annotation GO hgu95av2
updated 12.1 years ago by ▴ 400 • written 12.1 years ago by ▴ 490
0
votes
1
reply
992
views
Annotation databases--unable to get annotations
Annotation GO hgu95av2 probe limma Annotation GO hgu95av2 probe limma
updated 11.5 years ago by 65k • written 11.5 years ago by ★ 13k
0
votes
1
reply
4.0k
views
getAnnMap: package hgu95av2 not available
hgu95av2 hgu95av2
updated 11.2 years ago by 25k • written 11.2 years ago by ★ 13k
50 results • Page 1 of 1
Recent ...
Replies
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0
Dear Michael, I tried all three ways (the orIginal, increasing the number of required samples,and subsetting (the countdata and metadata be…
Comment: DESeq2 - dispersion estimation when there is none by Michael Love 41k
The red line does assume that shape but the fact the black points show that pattern is discussed in the 2014 paper. > Some caution is warr…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by James W. MacDonald 65k
I don't really follow what you are saying. All you have to do is delete the NCBI.sqlite db and *re-run the script exactly as you did above.…
Comment: Methylation Analysis experiment design using Limma by hortense96 • 0
Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…
Comment: Limma design with continuous and categorical covariates by hortense96 • 0
Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …
Votes
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
Answer: OrgDb for maize
Answer: DESeq2 - dispersion estimation when there is none
Comment: Cannabis and KEGGgraph
Awards • All
Scholar to Michael Love 41k
Popular Question to shepherl 3.8k
Scholar to Gordon Smyth 50k
Popular Question to taur.vil • 0
Teacher to Yuan Tian ▴ 280
Locations • All
UPF, Barcelona, Spain, just now
Germany, 1 minute ago
United States, 5 minutes ago
Germany, 7 minutes ago
Ghana, 7 minutes ago
Traffic: 916 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6