Bioconductor Hic

Showing : hic • reset

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282

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JuicerTools HiC HiCDCPlus Java Juicer

written 4 months ago by IsMM • 0

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783

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HiC Epigenetics HiCHIP ChIPSeq

22 months ago xubeisi • 0

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801

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HOMER HiCUP BAM HiC

2.4 years ago Ankit ▴ 20

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827

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HiCDCPlus HiC-DC+ HiCcompare HiC

updated 23 months ago by merve.sahn • 0 • written 3.5 years ago by mtS • 0

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544

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HiC hicrep HiCcompare

3.5 years ago changxu.fan ▴ 20

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1.6k

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diffHic GenomicInteractions edgeR HiC cooler

updated 3.7 years ago by Aaron Lun ★ 28k • written 3.7 years ago by Marco Blanchette ▴ 30

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822

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diffHic HiC InteractionSet

updated 4.0 years ago by Aaron Lun ★ 28k • written 4.0 years ago by girardot • 0

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850

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HiCompare HiC cool

updated 4.6 years ago by Kevin Blighe ★ 3.9k • written 4.6 years ago by c.chakraborty • 0

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1.5k

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hic

updated 5.3 years ago by bioparticles.melly • 0 • written 5.3 years ago by m.t.lorenc • 0

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1.5k

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diffhic gothic hicup hic-c hic

updated 5.4 years ago by Aaron Lun ★ 28k • written 5.4 years ago by mictadlo ▴ 10

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894

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hic diffhic gothic hicup hic-c

5.4 years ago mictadlo ▴ 10

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1.3k

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hic diffhic chromatin bedpe

updated 5.7 years ago by Aaron Lun ★ 28k • written 5.7 years ago by gryderart • 0

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1.2k

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diffhic hic interactionset contactmatrix inflate

updated 6.5 years ago by Aaron Lun ★ 28k • written 6.5 years ago by hwick1 ▴ 20

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1.6k

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diffhic hic

updated 6.5 years ago by Aaron Lun ★ 28k • written 6.5 years ago by hwick1 ▴ 20

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1.4k

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diffhic hicpro hic

6.7 years ago sergio.espeso-gil • 0

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1.6k

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GOTHiC hic

8.6 years ago Nathan Sheffield ▴ 10

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2.4k

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HiTC gothic diffhic HiC

8.6 years ago Bogdan ▴ 670

17 results • Page 1 of 1

Recent ...

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Answer: get BM error by James W. MacDonald 65k

The genes you present are orthologous mappings from D. rerio to other teleost fishes, so it is probably going to be difficult to map to NCB…

Answer: How to retrieve gene ontology GO class from gene list? by James W. MacDonald 65k

You can also use a combination of the `org.Hs.eg.db` and `GO.db` packages. ``` > library(GO.db) > library(org.Hs.eg.db) > go <- m…

Comment: Different Shrunk Log2FC according with reference by Michael Love 41k

I took a look and the posterior width for these (fairly rare) examples overlaps zero. So the posterior when it disagrees is not narrow. An…

Comment: How to tell and visualize up/down regulation of pathways from clusterprofiler gs by Guangchuang Yu ★ 1.2k

an example is also presented in <https://pubmed.ncbi.nlm.nih.gov/34557778/>.

Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k

Nothing would prevent you from using the `enrichGO` function (or any other function for over-representation analysis [ORA]) with only 14 ge…

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Reproducibility issue with scran together with lapply and BiocParallel

C: SGSeq: moving toward diffex from SGSeq analysis

DEXSeq-Error in FUN(X[[i]], ...) : subscript out of bounds

Subset DEXSeqDataSet In DEXSeq

How to get all possible comparisons in DiffBind

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