Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
homer
•
reset
0
votes
2
replies
1.1k
views
HOMER error: Where is the file?
HOMER
chip-seq
updated 17 months ago by
ATpoint
★ 4.0k • written 17 months ago by
兆豪
• 0
0
votes
0
replies
768
views
How to prepare HiCUP BAM output as input for HOMER?
HOMER
HiCUP
BAM
HiC
2.4 years ago
Ankit
▴ 20
0
votes
1
reply
1.1k
views
Identification of Overrepresented Transcription Factor Binding Motifs in the Promoters of a List of DE Genes
HOMER
Motif Analysis
updated 6.2 years ago by
Ou, Jianhong
★ 1.3k • written 6.2 years ago by
JMallory
• 0
1
vote
3
replies
2.1k
views
Using HOMER called peaks in DiffBind
diffbind
HOMER
6.3 years ago
Hesh
▴ 10
0
votes
1
reply
1.9k
views
Homer getDiffExpression.pl issue
homer
atac-seq
updated 6.7 years ago by
Maciej Jończyk
• 0 • written 6.7 years ago by
niu.shengyong
• 0
2
votes
2
replies
2.3k
views
Best way to get HiCUP-mapped Hi-C data into diffHiC
hicup
hi-c
diffhic
homer
6.7 years ago
e.jacobson
• 0
0
votes
1
reply
1.8k
views
Convert HOMER motif matrix to pfm?
homer
pwmenrich
updated 7.6 years ago by
Ou, Jianhong
★ 1.3k • written 7.6 years ago by
sarah.blackstone7734
• 0
7 results • Page
1 of 1
Recent ...
Replies
Comment: Minfi - estimatecellscount
by
clacarion
• 0
Thank you for your response, that's what i was thinking I will try with the rgset only and come back to tell you what's happening ! Best…
Answer: Minfi - estimatecellscount
by
James W. MacDonald
65k
Don't filter first. You are likely removing the CpGs that are used to estimate the cell counts.
Comment: limma models out of memory issue on Slurm HPC
by
SamGG
▴ 330
> Alternatively you could run each linear model fit (var1 to var6) in a separate batch run, and again that would presumably work. I think …
Comment: fgsea fork
by
shepherl
3.8k
For What its worth BiocManager should also be able to install the github remotes `BiocManager::install("ctlab/fgsea")`
Comment: fgsea fork
by
alserg
▴ 240
I'm also not sure what you mean by fork, but you also can install the latest version of fgsea directly from GitHub with `devtools::install_…
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Awards
• All
Popular Question
to
Jenny Drnevich
★ 2.0k
Popular Question
to
Dario Strbenac
★ 1.5k
Popular Question
to
Ankit
▴ 20
Popular Question
to
michael.s
• 0
Popular Question
to
James W. MacDonald
65k
Locations
• All
Italy,
8 minutes ago
United States,
10 minutes ago
Austria,
13 minutes ago
United States,
15 minutes ago
France,
22 minutes ago
Traffic: 812 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6