Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
hopach
•
reset
1
vote
5
replies
5.7k
views
HOPACH error: "negative length vectors are not allowed" in distancematrix(). Matrix too large?
hopach
updated 9.0 years ago by
kpollard
▴ 110 • written 9.1 years ago by
ejliaw
• 0
0
votes
1
reply
2.8k
views
ReadAffy can not find function read.AnnotatedDataFrame
Biobase
genefilter
affydata
limma
simpleaffy
hopach
affyio
Biobase
genefilter
affydata
updated 17.4 years ago by
James W. MacDonald
65k • written 17.4 years ago by
Georg Otto
▴ 510
0
votes
13
replies
2.2k
views
Bioconductor Digest, Vol 87, Issue 10
Clustering
hopach
Clustering
hopach
updated 13.9 years ago by
Richard Pearson
▴ 160 • written 14.0 years ago by
avinash gupta
▴ 130
0
votes
0
replies
1.5k
views
displaying clustering results in TreeView or MapleTree
Microarray
Clustering
Kidney
Ovarian
probe
hopach
Microarray
Clustering
Kidney
Ovarian
12.3 years ago
Mark Baumeister
▴ 40
0
votes
1
reply
1.3k
views
CRAN packages maintained by you
hexbin
gpls
RBGL
impute
Icens
hopach
maanova
RLMM
CORREP
cycle
hexbin
gpls
RBGL
Icens
updated 12.5 years ago by
Nicholas Lewin-Koh
▴ 430 • written 12.5 years ago by
Kurt Hornik
▴ 10
0
votes
2
replies
1.3k
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
updated 14.9 years ago by
Vincent J. Carey, Jr.
6.7k • written 14.9 years ago by
Paolo Innocenti
▴ 320
0
votes
3
replies
1.1k
views
hopach generates a wrong output
hopach
9.4 years ago • updated 9.3 years ago
Alogmail2@aol.com
▴ 90
0
votes
1
reply
1.1k
views
HOPACH clustering of genes
Clustering
hopach
Clustering
hopach
updated 15.8 years ago by
Shannon, William
▴ 20 • written 15.8 years ago by
Nathan Harmston
▴ 100
0
votes
0
replies
991
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
14.6 years ago
Samuel GRANJEAUD - IR/ICIM
▴ 60
0
votes
0
replies
991
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
14.8 years ago
Paolo Innocenti
▴ 320
0
votes
1
reply
971
views
How to extract Hopach MSS value
Clustering
hopach
Clustering
hopach
updated 16.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 16.2 years ago by
Prateek Singh
▴ 20
0
votes
1
reply
957
views
R terminated when i try HOPACH in a loop,why?
hopach
hopach
updated 19.0 years ago by
Seth Falcon
★ 7.4k • written 19.0 years ago by
Xiao Shi
▴ 90
0
votes
0
replies
932
views
How to use distance functions from hopach package in a heatmap?
hopach
hopach
18.8 years ago
kpollard
▴ 110
0
votes
0
replies
914
views
hopach and heatmap
Clustering
hopach
Clustering
hopach
17.9 years ago
Ivan Baxter
▴ 60
0
votes
0
replies
910
views
(no subject)
hopach
hopach
19.1 years ago
kpollard
▴ 110
0
votes
0
replies
906
views
HOPACH and .cdt which doesn't work with javatreeview
Clustering
hopach
Clustering
hopach
15.6 years ago
Sébastien Tourlet
▴ 20
0
votes
0
replies
881
views
About Hopach package
hopach
hopach
18.6 years ago
kpollard
▴ 110
0
votes
0
replies
874
views
[BioC}: export Hopoah to treeview
hopach
hopach
19.1 years ago
Anthony Bosco
▴ 500
0
votes
0
replies
825
views
Hopach cluster quality metrics
hopach
hopach
15.5 years ago
Khan, Anar
▴ 30
0
votes
0
replies
774
views
Why makeoutput() function is not included in hopach 1.4.3 version
Microarray
Clustering
hopach
Microarray
Clustering
hopach
15.9 years ago
Suprabhath Reddy
▴ 10
0
votes
0
replies
754
views
About Hopach package
Clustering
hopach
Clustering
hopach
18.7 years ago
z3076426@student.unsw.edu.au
▴ 10
0
votes
0
replies
544
views
Hopach: distancematrix and distancevector do not return identical results
documentation
bug
hopach
euclidean
distance
2.2 years ago
txema.heredia
• 0
22 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
by
shuwangxinze1996
• 0
Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough?
Comment: DESeq2 output used for PCA plot on R studio
by
Kevin Blighe
★ 3.9k
This comment helps.
Comment: DESeq2 output used for PCA plot on R studio
by
Kevin Blighe
★ 3.9k
I am not sure how your comment helps here?
Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR)
by
Michael Love
41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Votes
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
Awards
• All
Supporter
to
JKim
• 0
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Chris
• 0
Supporter
to
Jonathan
▴ 10
Popular Question
to
Bine
▴ 40
Locations
• All
Colombia,
17 minutes ago
France,
38 minutes ago
United States,
51 minutes ago
WEHI, Melbourne, Australia,
1 hour ago
Singapore,
1 hour ago
Traffic: 651 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6