6.5 years ago • updated 6.4 years ago
lacion
•
0
0
votes
10
replies
1.2k
views
4
votes
10
replies
1.1k
views
updated 5.9 years ago by
Mike Smith
★
5.0k
•
written 5.9 years ago by
willj
▴
30
0
votes
8
replies
2.5k
views
3
votes
8
replies
3.6k
views
updated 4 weeks ago by
mad6kj
•
0
•
written 7.7 years ago by
Sean Davis
21k
4
votes
8
replies
4.9k
views
updated 5.5 years ago by
Gordon Smyth
43k
•
written 5.5 years ago by
kritikamish99
▴
10
11
votes
5
replies
1.4k
views
updated 5.9 years ago by
Mark Cowley
▴
400
•
written 5.9 years ago by
willj
▴
30
2
votes
4
replies
301
views
updated 7 months ago by
Gordon Smyth
43k
•
written 7 months ago by
bastien_chassagnol
•
0
0
votes
3
replies
1.1k
views
0
votes
2
replies
926
views
updated 4.2 years ago by
Guido Hooiveld
★
3.0k
•
written 4.2 years ago by
Ellen O
•
0
0
votes
2
replies
1.0k
views
updated 4.0 years ago by
Stephanie M. Gogarten
▴
800
•
written 4.0 years ago by
catbriggsm
•
0
1
vote
2
replies
957
views
updated 3 months ago by
sci_djw
•
0
•
written 2.2 years ago by
researcher
•
0
0
votes
2
replies
1.3k
views
updated 6.1 years ago by
Matthew Ritchie
▴
1000
•
written 6.1 years ago by
Shi, Tao
▴
720
0
votes
1
reply
1.2k
views
updated 4.2 years ago by
Matthew Ritchie
▴
1000
•
written 4.2 years ago by
Guido Hooiveld
★
3.0k
Recent ...
Replies
Answer: tximeta countsFromAbundance for downstream analysis
by
Michael Love
33k
The counts will not be closely correlated to the TPM across genes, because the gene length is included in the gene count but not in the TPM…
Answer: DESeq2 - understanding intercept and contrasts
by
Michael Love
33k
For questions on setting up the statistical design and contrasts, I recommend to consult with a local statistician or someone familiar with…
Answer: Interaction terms and selection of coef in normal and shrunk results
by
Michael Love
33k
Please see the diagram in the vignette on interactions, but for further questions on setting up the design, I recommend to consult with a l…
Answer: about baseMean in DEseq2
by
Michael Love
33k
More information about the columns is here:
https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#access-…
Answer: DESeq2, what to do when controls are 7 times more abundant than treatments
by
Michael Love
33k
I generally recommend your option 2 here: filtering out genes unless they are minimally expressed in the lowly sequenced condition. This is…
Awards
• All
Scholar to
Michael Lawrence
11k
Popular Question to
hwu12
▴
10
Teacher to
Laurent Gatto
1.5k
Popular Question to
svlachavas
▴
780
Popular Question to
Hina Bandukwala
•
0
Locations
• All
China, 1 minute ago
United States, 37 minutes ago
WEHI, Melbourne, Australia, 1 hour ago
The city by the bay, 1 hour ago
United States, 1 hour ago
China, 1 minute ago
United States, 37 minutes ago
WEHI, Melbourne, Australia, 1 hour ago
The city by the bay, 1 hour ago
United States, 1 hour ago
Traffic: 321 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6