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grid.chromosome in quantsmooth, without cytobands?
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14.0 years ago
Paul Shannon
★ 1.1k
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ploting paired-end reads using GenomeGraphs
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updated 14.9 years ago by
Kasper Daniel Hansen
★ 6.5k • written 14.9 years ago by
Ramzi TEMANNI
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How to plot gene on their chromosome?
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15.4 years ago
Martin Morgan
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FW: How to plot microRNA chromosome location
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16.0 years ago
Dykema, Karl
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karyogram
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GenomeGraphs
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updated 16.4 years ago by
Oosting, J. PATH
▴ 550 • written 16.4 years ago by
Michael Gormley
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Comment: Supercells with Basilisk fails for dtype('float64') to dtype('int64') conversion
by
ATpoint
★ 4.5k
For the general audience, reticulate / python (which basilisk depends on / wraps) requires explicit declaration of integers, so one needs i…
Answer: Average expression of genes across replicates
by
ATpoint
★ 4.5k
Not sure what you're asking. The average expression across all samples is what the `baseMean` column of `results()` returns. This is simply…
Answer: Spike-in normalization method in ATACseq
by
ATpoint
★ 4.5k
This is unrelated to Bioconductor. You should reach out to the company tech support and ask for details of their product.
Answer: single cell RNA seq pseudobulk batch correction
by
James W. MacDonald
67k
You can exclude the females from the non-responders.
Answer: Normalized counts to be used in decoupleR from deseq2 results
by
James W. MacDonald
67k
No, you never use normalized counts for anything but plotting. Can you point out the example that uses normalized counts?
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Answer: Supercells with Basilisk fails for dtype('float64') to dtype('int64') conversion
Comment: Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chu
Comment: Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chu
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
A: DESeq2: Is it possible to convert read counts to expression values via TPM and r
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