Showing : impute • reset
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5
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Using Limma for proteomics (2D DIGE) datasets
Proteomics limma impute limmaGUI Proteomics limma impute limmaGUI
updated 8.8 years ago by • 0 • written 14.5 years ago by ▴ 60
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3
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1.3k
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Recent changes to Bioconductor packages
reposTools graph Rgraphviz simpleaffy impute reposTools graph Rgraphviz simpleaffy impute
20.2 years ago madman@jimmy.harvard.edu ▴ 850
1
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4
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6.1k
views
Error loading impute(): '/usr/lib/libgfortran.5.dylib' (no such file)
Install impute
updated 11 months ago by • 0 • written 2.2 years ago by • 0
0
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3
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1.1k
views
Unable to compile the impute package on debian with gcc 4.1
Cancer impute Cancer impute
updated 17.1 years ago by ▴ 60 • written 17.1 years ago by ★ 7.4k
1
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2
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274
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Impute does not work
impute
8 weeks ago Laura • 0
0
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2
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1.2k
views
Handling Missing Values
impute impute
updated 21.5 years ago by ★ 1.0k • written 21.5 years ago by ▴ 110
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2
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6.0k
views
impute package
impute BiocInstaller impute BiocInstaller
updated 12.2 years ago by 25k • written 12.2 years ago by ▴ 10
0
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2
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1.1k
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How to display chromosome rapresentation ?
CGH impute CGH impute
updated 15.1 years ago by 21k • written 15.1 years ago by ▴ 540
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3
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259
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impute.knn produces different results based on matrix order
impute
updated 7 weeks ago by 65k • written 8 weeks ago by • 0
0
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1
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1.8k
views
problem with impute.knn in the impute package
Clustering impute Clustering impute
updated 19.0 years ago by ▴ 360 • written 19.0 years ago by ▴ 150
0
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2
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1.7k
views
knn.imput and prcomp error
Microarray impute Microarray impute
updated 17.6 years ago by 65k • written 17.6 years ago by ▴ 30
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2
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1.2k
views
imputing missing data for 70mer array platform, need advice
aCGH CGH multtest impute aCGH oligo aCGH CGH multtest impute aCGH oligo
updated 17.3 years ago by 21k • written 17.3 years ago by ▴ 50
0
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4
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2.1k
views
How is fold change reported in the samr output?
siggenes impute siggenes impute
updated 13.6 years ago by 65k • written 13.6 years ago by ▴ 20
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1
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1.3k
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CRAN packages maintained by you
hexbin gpls RBGL impute Icens hopach maanova RLMM CORREP cycle hexbin gpls RBGL Icens
updated 12.5 years ago by ▴ 430 • written 12.5 years ago by ▴ 10
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1
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1.3k
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impute.knn
impute impute
updated 12.2 years ago by ★ 4.2k • written 12.2 years ago by ▴ 290
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2
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1.4k
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Error when using impute to get missing values
impute ArrayExpress impute ArrayExpress
updated 12.1 years ago by ★ 4.2k • written 12.1 years ago by ▴ 10
0
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1
reply
2.9k
views
Error using impute.knn function
Microarray Normalization impute Microarray Normalization impute
11.8 years ago Peter Davidsen ▴ 210
0
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1
reply
1.9k
views
impute package
impute impute
updated 11.6 years ago by 25k • written 11.6 years ago by ▴ 10
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3
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2.9k
views
Error installing impute package
impute impute
updated 11.0 years ago by ▴ 870 • written 11.0 years ago by ★ 3.0k
0
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3
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1.4k
views
Error installing (some) Bioconductor packages on Mac OSX under R-3.0.0?
GUI impute DNAcopy GUI impute DNAcopy
updated 11.0 years ago by ★ 8.2k • written 11.0 years ago by ★ 3.0k
0
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2
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1.3k
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Tigre Package question 3
Microarray impute PROcess convert mmgmos puma tigre trigger Microarray impute PROcess
updated 10.2 years ago by ▴ 60 • written 10.2 years ago by ▴ 50
1
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5
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1.7k
views
Linear model after imputation (impute.knn function)
impute
updated 8.9 years ago by 50k • written 8.9 years ago by ▴ 10
2
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3
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1.6k
views
champ.impute doesn't update beta matrix
champ impute bioconductor
updated 7.1 years ago by ▴ 90 • written 7.1 years ago by ▴ 10
2
votes
3
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2.1k
views
Imputation method selection (mass spectrometry) bimodal distribution
impute missing value imputation DEP massspectrometry
updated 6.4 years ago by 1.6k • written 6.4 years ago by ▴ 60
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1
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1.6k
views
Removing batch effect by sva or combat and subsequent correlation analysis by WGCNA
WGCNA impute sva
updated 2.9 years ago by ▴ 50 • written 2.9 years ago by • 0
0
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3
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3.5k
views
Error installing impute package
GUI impute DNAcopy GUI impute DNAcopy
updated 9.9 years ago by ★ 8.2k • written 9.9 years ago by ▴ 80
0
votes
1
reply
1.2k
views
Imputation problem in aCGH
aCGH Biobase multtest impute aCGH aCGH Biobase multtest impute aCGH
16.8 years ago Benjamin Otto ▴ 830
0
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1
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1.0k
views
Analysis of many Flagged spots
limma impute limma impute
updated 16.6 years ago by ▴ 40 • written 16.7 years ago by ★ 1.9k
0
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2
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1.4k
views
A list, a matrix and impute.knn for making data for SAMR
Microarray impute Microarray impute
updated 14.7 years ago by ▴ 60 • written 14.7 years ago by ▴ 90
0
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2
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2.3k
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Genotype imputation
impute impute
updated 14.5 years ago by ▴ 270 • written 14.5 years ago by ▴ 40
0
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0
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1.0k
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verification
GO limma impute oligo makePlatformDesign crlmm GO limma impute oligo makePlatformDesign
17.1 years ago Vasiliki Xiarchou ▴ 10
0
votes
0
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966
views
FW: Tigre Package question 3
impute PROcess mmgmos puma impute PROcess mmgmos puma
10.2 years ago Solanki, Anisha ▴ 60
0
votes
0
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1.3k
views
Problems with aCGH package
aCGH Genetics Cancer CGH impute aCGH aCGH Genetics Cancer CGH impute aCGH
19.9 years ago grischa tödt ▴ 30
0
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0
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1.6k
views
when to impute the missing value?
impute pcaMethods impute pcaMethods
16.5 years ago De-Jian ZHAO ▴ 240
0
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0
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948
views
Unable to compile the impute package on debian with gcc 4.1
impute impute
17.1 years ago Sebastian Bauer ▴ 60
0
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0
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1.5k
views
Possible methodologies for missing value imputation of continuous variables in a data frame in R
missing data missing value imputation impute MICE bioconductor
8.5 years ago svlachavas ▴ 830
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0
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1.1k
views
aCGH
aCGH CGH impute aCGH aCGH CGH impute aCGH
17.4 years ago Sean Davis 21k
0
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0
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1.1k
views
Bugs for impute package
bugs impute
7.6 years ago Shicheng Guo • 0
0
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0
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897
views
pcaMethods and categorical NAs
impute impute
14.3 years ago Antoni Picornell ▴ 40
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0
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1.1k
views
DNAcopy
aCGH impute DNAcopy aCGH snapCGH CGHcall aCGH impute DNAcopy aCGH snapCGH CGHcall
14.2 years ago Daniel Rico ▴ 110
0
votes
0
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1.1k
views
problem with impute.knn in the impute package
Clustering impute Clustering impute
19.0 years ago He, Yiwen NIH/CIT ▴ 360
0
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0
replies
2.1k
views
sva/ComBat with missing values?
impute impute
10.6 years ago W. Evan Johnson ▴ 850
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0
replies
967
views
Re: Re: segmentation error in pamr.knnimpute
pamr impute pamr impute
19.0 years ago Alice Le Bars ▴ 40
0
votes
0
replies
786
views
Introduction to DEP - data imputation
DEP impute
2.6 years ago catherine.li • 0
44 results • Page 1 of 1
Recent ...
Replies
Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR) by Michael Love 41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Comment: Trying to use enrichGO by fernanda.backsouza ▴ 10
With all my love, thank you Guido, GOxploreR beeing a big ally for me. I don't know how to be grateful right now.
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
You didn't generate it with an experiment, you made it up: Your PCA doesn't look like a good RNASeq experiment, because it's not.
Answer: Opposite sign of LFC in count plots of DEGs (DESeq2) by swbarnes2 ★ 1.3k
Your contrast is comparing LGR5 to Homeostasis. The bottom 2 are fine, it's the top one that is wrong. Are you sure this step isn't misla…
Comment: get BM error by James W. MacDonald 65k
I believe you need NCBI Gene IDs for KEGG, in which case you may need to map. The three genes you have shown here don't map, and of those t…
Votes
A: How to know if I should use voomWithQualityWeights() or not?
A: Weird results (ribosomal proteins / Y-linked genes) in limma/voom
Answer: Log-cpm values from limma
Answer: Log-cpm values from limma
Answer: Log-cpm values from limma
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Supporter to Jonathan ▴ 10
Popular Question to Bine ▴ 40
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