Showing : insilicomerging • reset
0
votes
0
replies
330
views
table (pData(eset_NONE)[,"Study"]); table(pData(eset_NONE)[,"Disease"]);
affy insilicomerging
3.1 years ago pratikshasharma47 • 0
1
vote
3
replies
552
views
Two microarrays merging (different experiments) - Error with esets (inSilicoMerging package)
inSilicoMerging microarray affymetrix microarrays
updated 3.5 years ago by 59k • written 3.5 years ago by • 0
0
votes
1
reply
925
views
InSilicoMerging error when using merge
insilicomerging error insilicodb expressionset
5.3 years ago andreas.pittroff • 0
0
votes
3
replies
993
views
error in drawing MDS plot for eset
MDSplot geneexpression insilicomerging
updated 6.2 years ago by 59k • written 6.2 years ago by ▴ 20
4
votes
8
replies
1.4k
views
Annotation Problem regarding double platform merged microarray eset using the inSilicoMerging R package, after differential expression analysis
inSilicoMerging doubleannotation affymetrix microarrays limma inSilicoDB
6.7 years ago svlachavas ▴ 780
1
vote
2
replies
1.8k
views
Combining ExpressionSet objects : error with function merge() in "inSilicoMerging"
combine expresiondataset insilicomerging
6.8 years ago alakatos ▴ 120
6
votes
4
replies
3.3k
views
Merge different datasets and perform differential expression analysis in limma
insilicomerging batcheffect limma differential gene expression bioconductor
updated 6.9 years ago by ★ 27k • written 6.9 years ago by ▴ 780
0
votes
0
replies
664
views
problem with insilicoMerging
insilicomerging
6.9 years ago carol white ▴ 680
1
vote
5
replies
1.2k
views
Appropriate merge of batches of the same array to create a final total ExpressionSet
frma bioconductor batcheffect Primeview insilicomerging
updated 7.1 years ago by ▴ 830 • written 7.1 years ago by ▴ 780
0
votes
0
replies
868
views
'DWD' method in 'inSilicoMerging' packages
inSilicoMerging
7.5 years ago Li Liu ▴ 100
0
votes
1
reply
947
views
inSilicoMerging:::mergeCOMBAT covariates
inSilicoMerging inSilicoMerging
updated 8.1 years ago by ▴ 10 • written 8.1 years ago by ▴ 50
0
votes
6
replies
1.8k
views
DWD method for batch effect removal
inSilicoMerging inSilicoMerging
updated 8.8 years ago by ★ 8.2k • written 8.8 years ago by ▴ 100
0
votes
2
replies
1.1k
views
inSilicoMerging and Limma
Colon hgu133a2 hgu133plus2 limma inSilicoMerging Colon hgu133a2 hgu133plus2 limma
9.0 years ago Ed Siefker ▴ 230
13 results • Page 1 of 1
Recent ...
Replies
Comment: R: problem with running time-series analysis software: Mfuzz by soda ▴ 80
I have solved this problem by myself. My data.frame is not suitable for Mfuzz.
Comment: R: problem with running time-series analysis software: Mfuzz by Kevin Blighe 3.5k
Cross-posted: https://www.biostars.org/p/9524023/
Comment: ROC plot for OPLS-DA by Eddie • 0
Hi, That was helpful. Thank you. How to do the same for the testing data?
Comment: ChIP-seq peak annotation to gene in ChIPseeker by Gyan Prakash Mishra • 0
After going through the package, I think all the peaks are annotated to genes irrespective of distance to TSS. There is also another functi…
Comment: lpsymphony compilation trouble by Cankun • 0
It's 2022 and it still works for lpsymphony_1.24.0
Votes
A: lpsymphony compilation trouble
Answer: Robust Multi-array Average could get negative value or not?
Answer: Robust Multi-array Average could get negative value or not?
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
Awards • All
Scholar to James W. MacDonald 59k
Scholar to Guido Hooiveld ★ 3.2k
Scholar to Kevin Blighe 3.5k
Scholar to SamGG ▴ 270
Prophet to johnmcma ▴ 10
Locations • All
Canada, just now
India, 3 minutes ago
France, 4 minutes ago
WEHI, Melbourne, Australia, 13 minutes ago
Republic of Ireland, 31 minutes ago
Traffic: 959 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6