Biostar Interaction

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176

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DESeq2 interaction coefficient LinearModel RNASeq

updated 9 weeks ago by Michael Love 39k • written 11 weeks ago by Pedro Milanez-Almeida ▴ 10

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299

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interaction DESeq2

updated 6 months ago by swbarnes2 ★ 1.2k • written 6 months ago by Tait • 0

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1.2k

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DifferentialExpression contrasts interaction DESeq2

written 9 months ago by Nicole ▴ 10

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410

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DESeq2 interaction pairwise

17 months ago Lucas • 0

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2.6k

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LRT DESeq2 interaction

updated 22 months ago by Kevin Blighe 3.7k • written 23 months ago by annamariabugaj ▴ 10

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726

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limma interaction

2.4 years ago Sindre ▴ 110

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544

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DESeq2 interaction differential expression

updated 2.6 years ago by Michael Love 39k • written 2.6 years ago by charles.foster ▴ 140

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461

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mircomb mrna mirna degs interaction

2.6 years ago andreia ▴ 10

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542

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deseq2 interaction model

updated 2.6 years ago by Michael Love 39k • written 2.6 years ago by aec ▴ 90

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452

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graphite interaction

updated 2.8 years ago by gabriele.sales ▴ 100 • written 2.8 years ago by emisecherre • 0

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700

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deseq2 interaction

updated 3.0 years ago by sebastian.lobentanzer ▴ 50 • written 3.0 years ago by ktrns • 0

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858

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random effects interaction limma rna-seq

3.7 years ago flippy23 • 0

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435

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edger deseq2 interaction design matrix

updated 4.0 years ago by James W. MacDonald 62k • written 4.0 years ago by Assa Yeroslaviz ★ 1.5k

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694

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DEXSeq interaction

4.1 years ago zhenzuo2 • 0

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577

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edge differential gene expression timecourse interaction

4.5 years ago rubi ▴ 110

15 results • Page 1 of 1

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Comment: error in ChAMP loading file by Benth • 0

Shouldn't this p-value, which I presume shows the significance of the fold change, be scale-independent? Additionally, shouldn't all of the…

Comment: AnnotationForge::makeOrgPackageFromNCBI - ERROR to access url (NCBI FTP site) by jeffbrick852 • 0

[us customer service][1] [1]: https://www.us-customer-service.com/

Answer: DEG analysis with Paired-end RNA-seq data using DESeq2, do I need to contain the by swbarnes2 ★ 1.2k

The vignette includes that in the design because the example is a mix of single and paired end reads, and that is added to the design so th…

Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by Gordon Smyth 47k

`PoolStatus` just indicates whether a sample is a pool or not, i.e., the first option.

Comment: How to map geneIds to ENTREZIDs by stacy.genovese • 0

James - I wish I knew where you lived so I could buy you a beer! Thank you so much for your help. I'm going to work now on converting th…

Votes

A: Limma-voom with external observation weights

Limma-voom with external observation weights

Comment: Error in .order_seqlevels(chrom_sizes[, "chrom"]) : !anyNA(m32) is not TRUE

Answer: How to map geneIds to ENTREZIDs

Awards • All

Scholar to James W. MacDonald 62k

Commentator to vs2001 ▴ 30

Scholar to Mike Smith ★ 5.9k