Showing : intersect • reset
5
votes
2
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540
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Intersecting two big dataframe
genomicrange intersect
updated 4.0 years ago by 65k • written 4.0 years ago by ▴ 30
0
votes
2
replies
876
views
feel confused when identifying overlapping regions by intersect method
GenomicRanges overlaps intersect
updated 5.1 years ago by ★ 11k • written 5.1 years ago by • 0
5
votes
9
replies
8.9k
views
subsetByOverlaps : comparing GRANGES and keeping all the information in the METACOLUMNS
granges bedtools intersect
updated 5.7 years ago by ▴ 70 • written 5.7 years ago by ▴ 670
2
votes
8
replies
5.3k
views
GenomicRanges: identify overlapping regions, get intersection between each overlapping pair and add gene coordinates (start, end, strand and ids)
genomicranges overlap intersect findoverlaps
6.3 years ago Caroline Grisbach Meissner ▴ 10
0
votes
1
reply
886
views
intersect ranges from a GAlignment object with a GRangesList
intersect grangeslist galignment
updated 6.9 years ago by 16k • written 6.9 years ago by • 0
3
votes
5
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1.6k
views
Extract coordinates of overlapping genomic intervals
genomicranges findoverlaps intersect
updated 7.7 years ago by ★ 13k • written 7.7 years ago by ▴ 110
6
votes
2
replies
4.7k
views
How to get the intersect and get the difference of a grange object while keeping meta data
genomicranges intersect
updated 7.9 years ago by 3.8k • written 7.9 years ago by ▴ 30
0
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4
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3.3k
views
[Solved]Preserve metadata column for retrieving common regions from two GRanges objects
granges intersect
8.1 years ago Jurat Shahidin ▴ 80
0
votes
9
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2.7k
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IRanges: reduce(), findOverlaps(), and intersect() by group
iranges findoverlaps intersect group
8.3 years ago pesquivel • 0
9 results • Page 1 of 1
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I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
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