Bioconductor Isoformswitchanalyzer

Showing : isoformswitchanalyzer • reset

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isoformswitchanalyzer isoform differential isoform usage

written 5.4 years ago by A ▴ 40

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2.2k

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isoformswitchanalyzeR rna-seq splice-variants

written 5.1 years ago by saddamhusain77 • 0

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1.7k

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AlternativeSplicing RNASeq IsoformSwitchAnalyzeR gtf

written 20 months ago by bpshtiwan ▴ 10

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DESeq2 LongRead DEXSeq IsoformSwitchAnalyzeR RNASeq

updated 4 days ago by Michael Love 41k • written 5 days ago by 09191919 • 0

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1.4k

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salmon IsoformSwitchAnalyzeR tximport RNASeqData

updated 8 months ago by k.vitting.seerup ▴ 120 • written 9 months ago by elva.gypsophila ▴ 10

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1.3k

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dplyr IsoformSwitchAnalyzeR

written 12 months ago by ramon.dslps • 0

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627

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IsoformSwitchAnalyzeR

10 months ago venura • 0

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266

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stringtie IsoformSwitchAnalyzeR pfamAnalyzeR gtf

updated 4 months ago by James W. MacDonald 65k • written 4 months ago by sumitra.20 • 0

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300

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IsoformSwitchAnalyzeR satuRn

7 months ago jbono ▴ 10

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427

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IsoformSwitchAnalyzeR

10 months ago Callum • 0

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140

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IsoformSwitchAnalyzeR

6 weeks ago Henry • 0

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367

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Isoform IsoformSwitchAnalyzeR

11 months ago Craig • 0

12 results • Page 1 of 1

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Comment: Methylation Analysis experiment design using Limma by hortense96 • 0

Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…

Comment: Limma design with continuous and categorical covariates by hortense96 • 0

Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …

Answer: minfi::read.metharray.exp by Basti ▴ 770

Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…

Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0

Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

Votes

Answer: OrgDb for maize

Answer: DESeq2 - dispersion estimation when there is none

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

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Scholar to Gordon Smyth 50k