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kmeans
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Error and questions about clustering & ploting functions in r packages cluster and mclust regarding kmeans method
cluster
mclust
limma
clusplot
kmeans
8.7 years ago
svlachavas
▴ 830
0
votes
4
replies
1.3k
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Gene clusters based on gene expression across samples
kmeans
gene expression
clustering
6.5 years ago • updated 6.4 years ago
Jane Merlevede
▴ 90
0
votes
1
reply
970
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Global Trend Analysis using results from EdgeR
EdgeR
clustering
differential gene expression
consensusclusterplus
kmeans
updated 6.0 years ago by
Aaron Lun
★ 28k • written 6.0 years ago by
anupriya.dalmia
• 0
0
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0
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2.7k
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pheatmap - Error in do_one(nmeth) : NA/NaN/Inf in foreign function call (arg 1)
pheatmap
kmeans
6.5 years ago
Assa Yeroslaviz
★ 1.5k
4 results • Page
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Answer: OrgDb for maize
by
Guido Hooiveld
★ 3.9k
I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …
Comment: Theoretical WGCNA Question
by
Garrett
• 0
Thanks Peter!
Comment: FGSEA pre-ranked input in increasing order or decreasing
by
sropri
• 0
Thank you!
Comment: FGSEA pre-ranked input in increasing order or decreasing
by
alserg
▴ 240
They are reorder in the decreasing order.
Comment: significant difference of p-values with dream() after updating VariancePartition
by
Le
• 0
Thanks for your reply @gabrielhoffman ! I've been trying to isolate the changes, and v1.32.5 had the same results as v1.33.1 while v1.30.0…
Votes
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Comment: DEXSeq DEXSeqDataSet count matrix duplication
Comment: Error in champ.load(): The following specified files do not exist
Answer: Error in read.metharray(basenames = files, extended = extended, verbose = verbos
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