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linux
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tximport ERROR : all(file.exists(files)) is not TRUE
Linux
R
tximport
2.1 years ago
nakane_clan
• 0
1
vote
6
replies
1.3k
views
How to install DEXSeq on R 3.4.4
DEXSEq
Linux
updated 5.0 years ago by
Alejandro Reyes
★ 1.9k • written 5.0 years ago by
justinkablan225
• 0
0
votes
1
reply
977
views
ChemmineOB Installation RHEL
ChemmineOB
Linux
Installation
5.1 years ago
jandrosavich
• 0
0
votes
2
replies
5.3k
views
[Resolved] RcppArmadillo pckg ERRORS : non-zero exit status (and so DESeq2 also)
DESEq2
R
linux
RcppArmadillo
5.2 years ago
RS1
• 0
0
votes
0
replies
983
views
Job:
Bioinformatician ('CHBIO15) (m/f)
bioinformatician job
Linux
NGS
Job
5.4 years ago
l.brown
▴ 10
0
votes
4
replies
4.3k
views
Problems Installing biomaRt
biomart
linux
updated 3.3 years ago by
Martin Morgan
25k • written 6.0 years ago by
christopher.mcfall
• 0
0
votes
0
replies
1.2k
views
Job:
Bioinformatics Engineer / Data Analyst
python
bio
ngs
linux
Job
6.1 years ago
EMBL Recruitment
• 0
1
vote
0
replies
1.4k
views
Problems running oligo functions in parallel on a linux computer
biocparallel
oligo
rma
linux
parallel
6.3 years ago
s.munster
▴ 40
0
votes
1
reply
1.3k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 6.4 years ago by
Mike Smith
★ 6.5k • written 6.5 years ago by
maxime.fortin
• 0
1
vote
4
replies
2.0k
views
Rsubread install problems on CentOS 6.8/R3.4.1/gcc/4.8.2
linux
rsubread
installation
updated 6.8 years ago by
Mike Smith
★ 6.5k • written 6.8 years ago by
hjmangalam
• 0
0
votes
6
replies
2.3k
views
Chipseeker is unavabile on Linux CentOS7 ?
Bioconduct or
Chipseeker
CentOS7
Linux
installation
updated 7.5 years ago by
Guangchuang Yu
★ 1.2k • written 7.5 years ago by
spsp9987
• 0
0
votes
4
replies
2.8k
views
Unable to install Rcpp package for genefo
Rcpp
genefo
linux
linux mint
Rstudio
updated 7.7 years ago by
mfox
• 0 • written 7.7 years ago by
anjali.krishna1008
• 0
0
votes
1
reply
1.2k
views
R slow, using all physical memory and 20GB Virt
linux
r
phylogenetic
computational biology
updated 8.8 years ago by
Hervé Pagès
16k • written 8.8 years ago by
guilherme
• 0
3
votes
1
reply
1.2k
views
best server maintenance practices
linux
R
server
updated 9.6 years ago by
James W. MacDonald
65k • written 9.6 years ago by
Matthew McCormack
▴ 180
14 results • Page
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Comment: DESeq2 setting significant p-value
by
Michael Love
41k
It does not resort. Also the dataset and results will have the same row names from object creation throughout the analysis.
Comment: Input Question for deseq.r
by
ATpoint
★ 4.0k
It is unclear what "deseq.r" is. It is not part of DESeq2, and almost certainly no part of RSeqAn. Please add details, and keep in mind tha…
Answer: DESEQ2 output gives multiple groups when only 2 groups are present
by
ATpoint
★ 4.0k
In the first PCA plot there is almost certainly some hidden character like whitespaces in the column from colData that encodes this group. …
Answer: A ComBat-seq issue: the covariates are confounded
by
ATpoint
★ 4.0k
```r > table(batch, group) group batch egfr gfp her2 1 0 12 5 2 6 6 0 ``` All of her2 is batch2, all of egfr i…
Comment: DESeq2 setting significant p-value
by
Dev
• 0
after running DESeq2 does it sort the value on the basis of pvalue, or anything, or does it give the data back in the input format I have …
Votes
Using GRanges and IRanges to simply get all chromosome data
A: Using GRanges and IRanges to simply get all chromosome data
Comment: Reading huge bismark coverage files using bbseq::read.bismark
Answer: Reading huge bismark coverage files using bbseq::read.bismark
Answer: Reading huge bismark coverage files using bbseq::read.bismark
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