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linux
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tximport ERROR : all(file.exists(files)) is not TRUE
Linux
R
tximport
3.2 years ago
nakane_clan
• 0
0
votes
4
replies
5.7k
views
Problems Installing biomaRt
biomart
linux
updated 4.4 years ago by
Martin Morgan
25k • written 7.1 years ago by
christopher.mcfall
• 0
1
vote
6
replies
1.7k
views
How to install DEXSeq on R 3.4.4
DEXSEq
Linux
updated 6.0 years ago by
Alejandro Reyes
★ 1.9k • written 6.0 years ago by
justinkablan225
▴ 10
0
votes
1
reply
1.3k
views
ChemmineOB Installation RHEL
ChemmineOB
Linux
Installation
6.2 years ago
jandrosavich
• 0
0
votes
2
replies
6.5k
views
[Resolved] RcppArmadillo pckg ERRORS : non-zero exit status (and so DESeq2 also)
DESEq2
R
linux
RcppArmadillo
6.3 years ago
RS1
• 0
0
votes
0
replies
1.3k
views
Job:
Bioinformatician ('CHBIO15) (m/f)
bioinformatician job
Linux
NGS
Job
6.4 years ago
l.brown
▴ 10
0
votes
0
replies
1.5k
views
Job:
Bioinformatics Engineer / Data Analyst
python
bio
ngs
linux
Job
7.1 years ago
EMBL Recruitment
• 0
1
vote
0
replies
1.8k
views
Problems running oligo functions in parallel on a linux computer
biocparallel
oligo
rma
linux
parallel
7.4 years ago
s.munster
▴ 40
0
votes
1
reply
1.6k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 7.5 years ago by
Mike Smith
★ 6.6k • written 7.6 years ago by
maxime.fortin
• 0
1
vote
4
replies
2.4k
views
Rsubread install problems on CentOS 6.8/R3.4.1/gcc/4.8.2
linux
rsubread
installation
updated 7.8 years ago by
Mike Smith
★ 6.6k • written 7.8 years ago by
hjmangalam
• 0
0
votes
6
replies
2.7k
views
Chipseeker is unavabile on Linux CentOS7 ?
Bioconduct or
Chipseeker
CentOS7
Linux
installation
updated 8.5 years ago by
Guangchuang Yu
★ 1.2k • written 8.5 years ago by
spsp9987
• 0
0
votes
4
replies
3.3k
views
Unable to install Rcpp package for genefo
Rcpp
genefo
linux
linux mint
Rstudio
updated 8.8 years ago by
mfox
• 0 • written 8.8 years ago by
anjali.krishna1008
• 0
0
votes
1
reply
1.5k
views
R slow, using all physical memory and 20GB Virt
linux
r
phylogenetic
computational biology
updated 9.9 years ago by
Hervé Pagès
16k • written 9.9 years ago by
guilherme
• 0
3
votes
1
reply
1.4k
views
best server maintenance practices
linux
R
server
updated 10.6 years ago by
James W. MacDonald
68k • written 10.6 years ago by
Matthew McCormack
▴ 180
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Comment: limma::voom vs edgeR::voomLmFit - when to use?
by
Gordon Smyth
52k
voomLmFit() is in edgeR instead of limma because it needs to call edgeR::glmFit() internally to determine which of the zero observations al…
Comment: limma::voom vs edgeR::voomLmFit - when to use?
by
Geoff
• 0
Just wondering--why was this function put into `edgeR` rather than `limma`? Maybe a bit technical, but it is a little confusing from an out…
Comment: cannot download atena annotation for human
by
Davide
• 0
Hi Robert, I was able to solve the problem. Indeed, it stems from the co-occurrence of two different AnnotationHub available for hg38. …
Comment: Setting ylims in bam coverage plot and assigning compound sashimi numbers to ove
by
macdonaldfrench7286566
• 0
Regarding the ylim for the coverage [space waves][1], have you tried accessing the ylim slot of the CoverageTrack object after you've creat…
Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an
by
Kateřina
• 0
I unfortunately haven't. Non-tidy grammar is fine, but I have wanted to use tidy-only grammar. Thank you nonetheless!
Votes
Answer: parameters of filterByExpr
Answer: DESeq2 Apeglm Coefficient Reordering / Log2FoldChange Comparison Change
Answer: DESeq2 Apeglm Coefficient Reordering / Log2FoldChange Comparison Change
Answer: DESeq2 Apeglm Coefficient Reordering / Log2FoldChange Comparison Change
Answer: GAlignments Cigar to GRanges
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