Biostar LncRNA

Showing : lncRNA • reset

votes

replies

844

views

recount RNAseq gencode lncRNA gene annotation

updated 3.8 years ago by chris.wilks ▴ 60 • written 3.9 years ago by francesco.gandolfi ▴ 20

votes

1.0k

views

GenomicFeatures TPM FPKM lncRNA

4.7 years ago Ina Hoeschele ▴ 620

votes

replies

2.1k

views

lncRNA featureCounts STAR annotation

updated 4.7 years ago by Wei Shi ★ 3.5k • written 4.7 years ago by inah ▴ 10

votes

replies

896

views

microarray lncrna microrna mrna raw data

updated 5.2 years ago by Axel Klenk ▴ 990 • written 5.2 years ago by ntagaras • 0

votes

replies

2.6k

views

arraystar lncRNA annotation annotationdbi

updated 7.5 years ago by xiangy7 • 0 • written 7.9 years ago by Kevin Coombes ▴ 430

5 results • Page 1 of 1

Recent ...

Replies

Comment: DESeq2 and heatmap for multiple comparisons by artem.vorobyev • 0

this I already did. My question is how to visualize differentially expressed genes on the heatmap for all 3 groups (healty->lesion->treat…

Comment: athPkgBuilder data source :missing probesets by nicklesteele532 • 0

> >>> > >>> How to handle the one probeset to multiple locus mappings? I can > >think 3 > >>> possible solutions: > >>> 1. pick the "best" …

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

> sum(width(gr_toexclude)) [1] 2713499861 I excluded everything which was not locus. If small rna locus is from 2000 to 4000 and next locu…

Comment: Why in Bioconductor community people rarely upvote questions? by Hervé Pagès 16k

BTW I fail to see how the lack of upvotes to a question would be discouraging as long as you get a good answer. OTOH I can see how failing …

Answer: DESeq2 and heatmap for multiple comparisons by swbarnes2 ★ 1.2k

If you want to know what genes are different between lesion and treated, compare them to each other.

Votes

Comment: recount 3 protect read length metadata

Answer: Doubts about manipulation and annotation of microarray files deposited at GEO

C: Batch correction in DESeq2

Comment: Strand information in a GAlignmentsList object derived from strand-specific pair

Awards • All